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Sample 3300022370
3300022370: Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.182 (Metagenome Metatranscriptome)
Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.182 (Metagenome Metatranscriptome)
Sequencing Status
Permanent Draft
Sequencing Center
DOE Joint Genome Institute (JGI)
Published?
N
Use Policy
Open
Dataset Contents
Total Genome Size
57539366
Sequencing Scaffolds
11
Novel Protein Genes
14
Associated Families
14
Dataset Phylogeny
Taxonomy Groups
Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta
2
Not Available
7
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium
1
All Organisms → cellular organisms → Eukaryota → Sar
1
Ecosystem and Geography
Ecosystem Assignment (GOLD)
Name
Estuarine Microbial Communities From The Columbia River Estuary, To Analyze Effect Of Nutrient Fluxes, A Time Series
Type
Environmental
Taxonomy
Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine → Estuarine Microbial Communities From The Columbia River Estuary, To Analyze Effect Of Nutrient Fluxes, A Time Series