Basic Information | |
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IMG/M Taxon OID | 3300021552 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0117787 | Gp0124802 | Ga0224709 |
Sample Name | Marine sponge C. singaporensis microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'control', co15aic 200bp no Eukaryotes last |
Sequencing Status | Finished |
Sequencing Center | University of New South Wales |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 111140844 |
Sequencing Scaffolds | 23 |
Novel Protein Genes | 24 |
Associated Families | 14 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
Not Available | 15 |
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium | 1 |
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium | 3 |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Polychaeta → Sedentaria → Scolecida → Capitellidae → Capitella → Capitella teleta | 1 |
All Organisms → cellular organisms → Bacteria | 3 |
Ecosystem Assignment (GOLD) | |
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Name | Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps |
Type | Host-Associated |
Taxonomy | Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Coelocarteria Singaporensis (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) |
Location Information | ||||||||
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Location | Upa-Upasina CO2 seeps 'control' site, Papua New Guinea | |||||||
Coordinates | Lat. (o) | -9.828217 | Long. (o) | 150.820517 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F001905 | Metagenome | 619 | Y |
F003751 | Metagenome / Metatranscriptome | 470 | Y |
F013419 | Metagenome | 271 | Y |
F027869 | Metagenome | 193 | Y |
F028775 | Metagenome | 190 | Y |
F036270 | Metagenome | 170 | Y |
F038198 | Metagenome | 166 | Y |
F067815 | Metagenome | 125 | Y |
F072354 | Metagenome / Metatranscriptome | 121 | Y |
F072439 | Metagenome | 121 | N |
F080142 | Metagenome | 115 | Y |
F085224 | Metagenome | 111 | N |
F085818 | Metagenome | 111 | N |
F098230 | Metagenome | 104 | N |
Scaffold | Taxonomy | Length | IMG/M Link |
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Ga0224709_1005519 | Not Available | 1552 | Open in IMG/M |
Ga0224709_1008644 | Not Available | 538 | Open in IMG/M |
Ga0224709_1008899 | Not Available | 568 | Open in IMG/M |
Ga0224709_1009446 | Not Available | 992 | Open in IMG/M |
Ga0224709_1012696 | Not Available | 755 | Open in IMG/M |
Ga0224709_1026132 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium | 583 | Open in IMG/M |
Ga0224709_1038117 | Not Available | 630 | Open in IMG/M |
Ga0224709_1042876 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium | 1215 | Open in IMG/M |
Ga0224709_1043899 | Not Available | 510 | Open in IMG/M |
Ga0224709_1044467 | Not Available | 576 | Open in IMG/M |
Ga0224709_1060029 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium | 513 | Open in IMG/M |
Ga0224709_1065881 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium | 512 | Open in IMG/M |
Ga0224709_1070257 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Annelida → Polychaeta → Sedentaria → Scolecida → Capitellidae → Capitella → Capitella teleta | 559 | Open in IMG/M |
Ga0224709_1093106 | Not Available | 1103 | Open in IMG/M |
Ga0224709_1095408 | All Organisms → cellular organisms → Bacteria | 678 | Open in IMG/M |
Ga0224709_1102113 | All Organisms → cellular organisms → Bacteria | 564 | Open in IMG/M |
Ga0224709_1106616 | Not Available | 518 | Open in IMG/M |
Ga0224709_1125612 | Not Available | 919 | Open in IMG/M |
Ga0224709_1127661 | Not Available | 561 | Open in IMG/M |
Ga0224709_1136277 | All Organisms → cellular organisms → Bacteria | 560 | Open in IMG/M |
Ga0224709_1138127 | Not Available | 878 | Open in IMG/M |
Ga0224709_1138690 | Not Available | 552 | Open in IMG/M |
Ga0224709_1140082 | Not Available | 563 | Open in IMG/M |
Scaffold ID | Protein ID | Family | Sequence |
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Ga0224709_1005519 | Ga0224709_10055191 | F085224 | RFKAIVMFPYSIYSVTMLELLELGVPMFYPSKSLLKRWDGRYGMMWHRTDYYGQRKAGGFSNIAYGKDSAPDPNDSVNREALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTSSTPA |
Ga0224709_1008644 | Ga0224709_10086441 | F028775 | LKELKQKAKDVVMESGTPDSLAIALDQVSKKIGLRWNQDLQALPNFKN |
Ga0224709_1008899 | Ga0224709_10088991 | F085224 | MVELLQMGVPMFYPSKSLLKRWDESYGMMFHRTNAFGERRAGGFSNVAYGKGAMPDPNDSVNREALHYWLEKSEWYNWDVRYFDSPADLHEKLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTA |
Ga0224709_1009446 | Ga0224709_10094462 | F085224 | SVFSGMMLELIQMGVPMFYPSKSLLKRWDEKYGMMFHRTNAFGERRAGGFSNIAYGKDSAPDPNDSVNQDALHYWLDKSEFYYWDVRCFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDARWAEIRRDLVKTSSTPA |
Ga0224709_1012696 | Ga0224709_10126962 | F085224 | RPARLRHPRAHFRDYVTGISEAFNNFSYRDLLRFKAVVMFPYSVYSGVMIELIQMGVPMFYPSKRLLKRWDEKYGMMFHRTNAFGERRAGGFSNIAYGKDSAPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDTRWAEIRRDLTKTSSTPA |
Ga0224709_1026132 | Ga0224709_10261322 | F072439 | MSVLPRTQLGYTLGIRRDKDITSQGEKVPKNPFEESRGRTRMAGEKRVDIFAVRPDEAPFSYTKGTNLPKRFTQTLDIPIEKEEEA |
Ga0224709_1038117 | Ga0224709_10381172 | F085224 | FSYQDLLRFKAIVMFPYSIWSGVMLELLEMGVPMFYPSKILLKRWHERYEMVYQRSSGGRRSAGGFSNIAYGADSAPDPNDGVNREALHYWLDKSEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLAKTSSTPA |
Ga0224709_1042876 | Ga0224709_10428762 | F003751 | MASYTAEKGAILQPGNQINRLSSYNTEGVFGWPGFELYEMVGYVKVDNLSADKADNKSFNLTVPSPDRRSSDRVRDDRTSLVVQADADRPAYIYSASIAIGQDIPSAGEPSYPATPLTADIDGTNTEILLFGPDNSGSPRGVPATQADGLAAATAITTAFASGTIAQGESDVSVAEAPFWTSVTTAGIDDQDAANSMMYRVTSDTTFKVYNVNGVTSTTVDGDGVFISSADKDAGKAAYIICRVTYLRPAAATTCMDIVGSLDFASQVGGSDS |
Ga0224709_1043899 | Ga0224709_10438992 | F085818 | FPVEIERGPFDNKYTPELLKHHIETGVLGLLRIKHNGRIIAGYVIRINVYPTAKRLLEILFIFGRNLNLRVGKQIFKKLEDLARQLKLDGIELTGRMQWNKVCDKLGFSDQQYIQRTKWLTY |
Ga0224709_1044467 | Ga0224709_10444672 | F085224 | YPSKSLLKRWDESYGMMFHRTNAFRERRAGGFSNIAYGADSAPDPNDSVNPEALHYWLDKAEFYNWDVRYFGSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTSSTPA |
Ga0224709_1060029 | Ga0224709_10600291 | F072354 | RRPDDRVRDDRTSLVVQASTDRPAYIYGASVAIAQDLPAGGLATFPASPVTADLGGTTGELLLLGPNNGGVPFGVPSTQQNGLAAASSPIQASSSLIAQGLTDTTTGDLPFWTVVTGGGITAANAANSMMYKVTADTTFKVFNVDAIANTTVSGDGVFISQADSDAGRAA |
Ga0224709_1065881 | Ga0224709_10658811 | F027869 | MEHAKAKKAKGKAEKALAQMMMEAEMVKASEADLQPEDGYINPMGRIGVVRPTTYSLTNQLDGTTTQSVIN |
Ga0224709_1070257 | Ga0224709_10702571 | F085224 | RAALNGFSYQDLLRFKAIVMFPYSAFSGIMLELIEMGVPMFYPSKSLLKRWDESYGMMFQRTSGYGRRSSGGFSNIAYGKDLMPDPNDGVNREALHYWLEKSEWYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRDERWAEIKCDLTKTA |
Ga0224709_1093106 | Ga0224709_10931062 | F080142 | MKVGAGEFIKTDSGEVIWGSEAFIDEVFKTLYGDDFRNEIWSYNDALQKIKNLVQQVEIK |
Ga0224709_1093106 | Ga0224709_10931064 | F036270 | MHIESTDKQGVFRACKDGHKLLELINDMGWDYDRFSSSGQETYDKICTILATVKEVKDET |
Ga0224709_1095408 | Ga0224709_10954082 | F013419 | MRESKYSFLYRNSDGHVMRPESFLNINKGRTLSSSQLRMLGIEKIKNPSYKRQATSIKRQAAST |
Ga0224709_1102113 | Ga0224709_11021131 | F067815 | MENVNSTFLVLKIREDKNPKGETEITVAKGFDTLTDAKKYKDAKDSIERLTPMEYWVTSYKIQQIFYKSFVQTEKNSWKDLVSV |
Ga0224709_1106616 | Ga0224709_11066161 | F085224 | RAALNGFSYQDLLRFKAIVMFPHSTFSGIMLELLQMGVPMFYPSKSLLKRWDESYGMMFQRTSGPGRRRAGGFSNVAYGKGSAPDPNDSVNQDALHYWLEKAEWYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRAQMDKIRDERWAEIRRDLTKTNSSGV |
Ga0224709_1125612 | Ga0224709_11256121 | F085224 | MFPYSVFSVTMLELLQMGVPMYYPSKSLLKRWDERYGMMWHRTNSFRQRRAGGFSNIAYGKGSMPDPNDSVNRDALHYWLEKAEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRDARWAEIRRDLAKSNSTPA |
Ga0224709_1127661 | Ga0224709_11276612 | F085224 | FPYSAFSGIMLELLEMGVPMFYPSKRLLKRWDESYGMMFQRTSGYGRRSSGGFSNIAYGKDLMPDPNDGVNREALHYWLEKSEWYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRDERWAEIRRDLTKTA |
Ga0224709_1136277 | Ga0224709_11362772 | F001905 | MKYPFYSRMTILLCVGGFSPIMIHHIIMKLWDVSTLRAAEFTFIVCIPIAFWMAEKINERWNDEDQ |
Ga0224709_1138127 | Ga0224709_11381272 | F098230 | MTDSIIMAIYILCGLTIAAFGILLTGFYYFGDLTMPGIFAWVAPLMIPLGIVTIIVGEREAR |
Ga0224709_1138690 | Ga0224709_11386901 | F085224 | GMMFHRTNAFGERRAGGFSNVAYGKGSMPDPNDGVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKAADFKAMHRDVLKTRARMDKIRDERWAEIKRDLAKTSSTPA |
Ga0224709_1140082 | Ga0224709_11400821 | F038198 | QTKQYRYNKFLQVAMAIEKVTLKNVRVTVNFDIDLDTLKRYLETKERDFDDVMAIYDMICTQSDRLNEQGEPENIRAYFCIDPETYVLLEQQVKADLKKSYVTDSDHPHLRRIK |
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