Overview
| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300020705 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0063444 | Gp0053432 | Ga0214177 |
| Sample Name | Freshwater microbial communities from Trout Bog Lake, WI - 27AUG2007 epilimnion |
| Sequencing Status | Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Published? | Y |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 84769303 |
| Sequencing Scaffolds | 119 |
| Novel Protein Genes | 150 |
| Associated Families | 127 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| Not Available | 48 |
| All Organisms → cellular organisms → Bacteria | 7 |
| All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 35 |
| All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | 1 |
| All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida → Trichomonadidae → Trichomonas → Trichomonas vaginalis → Trichomonas vaginalis G3 | 1 |
| All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 10 |
| All Organisms → Viruses → Predicted Viral | 13 |
| All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata | 4 |
Ecosystem and Geography
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Freshwater Microbial Communities From Lake Mendota And Trout Bog Lake, Wisconsin, Usa |
| Type | Environmental |
| Taxonomy | Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater → Freshwater Microbial Communities From Lake Mendota And Trout Bog Lake, Wisconsin, Usa |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | freshwater lake biome → epilimnion → lake water |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Trout Bog, Vilas County, Wisconsin, USA | |||||||
| Coordinates | Lat. (o) | 46.041 | Long. (o) | -89.686 | Alt. (m) | N/A | Depth (m) | N/A |
| Location on Map | ||||||||
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