Basic Information | |
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IMG/M Taxon OID | 3300018527 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0117946 | Gp0216915 | Ga0193021 |
Sample Name | Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_144 - TARA_N000003179 (ERX1782218-ERR1712041) |
Sequencing Status | Permanent Draft |
Sequencing Center | Canada's Michael Smith Genome Sciences Centre |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 17660727 |
Sequencing Scaffolds | 33 |
Novel Protein Genes | 42 |
Associated Families | 30 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
Not Available | 16 |
All Organisms → Viruses → Predicted Viral | 4 |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis | 5 |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Pseudodiaptomidae → Pseudodiaptomus → Pseudodiaptomus poplesia | 4 |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda | 3 |
All Organisms → cellular organisms → Bacteria | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Type | Environmental |
Taxonomy | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | marine biome → marine water body → sea water |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) |
Location Information | ||||||||
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Location | North Atlantic Ocean: TARA_144 | |||||||
Coordinates | Lat. (o) | 36.3698 | Long. (o) | -72.9669 | Alt. (m) | N/A | Depth (m) | 5 |
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