Basic Information | |
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IMG/M Taxon OID | 3300017365 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0128947 | Gp0211963 | Ga0186251 |
Sample Name | Metatranscriptome of marine eukaryotic communities from Ross Sea in marine media K with soil extract, 1 C, 36 psu salinity and 367 ?mol photons light - Geminigera sp. Caron Lab Isolate (MMETSP1102) |
Sequencing Status | Permanent Draft |
Sequencing Center | National Center for Genome Resources |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 51842222 |
Sequencing Scaffolds | 49 |
Novel Protein Genes | 54 |
Associated Families | 45 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
Not Available | 23 |
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta | 2 |
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae | 4 |
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712 | 8 |
All Organisms → cellular organisms → Eukaryota → Cryptophyceae | 6 |
All Organisms → cellular organisms → Bacteria | 1 |
All Organisms → cellular organisms → Eukaryota | 1 |
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales | 2 |
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Hemiselmidaceae → Hemiselmis → Hemiselmis andersenii | 1 |
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → unclassified Rhodopirellula → Rhodopirellula sp. TMED11 | 1 |
Ecosystem Assignment (GOLD) | |
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Name | The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp) |
Type | Host-Associated |
Taxonomy | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp) |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | marine biome → marine water body → sea water |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) |
Location Information | ||||||||
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Location | Ross Sea | |||||||
Coordinates | Lat. (o) | N/A | Long. (o) | N/A | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map | ||||||||
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