NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300014574

3300014574: Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR11_S1_MetaG



Overview

Basic Information
IMG/M Taxon OID3300014574 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0127568 | Gp0198141 | Ga0180011
Sample NameGroundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR11_S1_MetaG
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size36233086
Sequencing Scaffolds1
Novel Protein Genes1
Associated Families1

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Archaea1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameGroundwater Microbial Communities From Three Deep Subsurface Sites In Europe
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater → Groundwater Microbial Communities From Three Deep Subsurface Sites In Europe

Alternative Ecosystem Assignments
Environment Ontology (ENVO)freshwater biomeplanetary subsurface zonegroundwater
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Subsurface (non-saline)

Location Information
LocationFinland: the Olkiluoto Island
CoordinatesLat. (o)61.2413Long. (o)21.4947Alt. (m)N/ADepth (m)420
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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