Sample 3300014541

Overview

Basic Information
IMG/M Taxon OID	3300014541 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0121297 \| Gp0151563 \| Ga0134391
Sample Name	Human fecal microbial communities from obese patients in Germany - AS44_12
Sequencing Status	Permanent Draft
Sequencing Center	University of Hohenheim
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	94611170
Sequencing Scaffolds	6
Novel Protein Genes	10
Associated Families	10

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Coriobacteriales → Coriobacteriaceae → Collinsella	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Human Fecal Microbial Communities From Obese Patients In Germany
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Obese Patients In Germany

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal distal gut

Location Information
Location	Germany
Coordinates	Lat. (^o)	N/A	Long. (^o)	N/A	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F032312	Metagenome / Metatranscriptome	180	N
F044555	Metagenome / Metatranscriptome	154	N
F050794	Metagenome	145	N
F060985	Metagenome / Metatranscriptome	132	N
F064725	Metagenome	128	N
F064817	Metagenome	128	N
F098313	Metagenome	104	N
F099269	Metagenome	103	N
F102167	Metagenome	102	N
F105375	Metagenome	100	N

Scaffold	Taxonomy	Length	IMG/M Link
Ga0134391_100078	Not Available	86190	Open in IMG/M
Ga0134391_103432	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	3673	Open in IMG/M
Ga0134391_105043	All Organisms → cellular organisms → Bacteria	2433	Open in IMG/M
Ga0134391_107748	All Organisms → Viruses → Predicted Viral	1545	Open in IMG/M
Ga0134391_109632	Not Available	1231	Open in IMG/M
Ga0134391_118751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Coriobacteriales → Coriobacteriaceae → Collinsella	658	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0134391_100078

Not Available

86190

Open in IMG/M

Ga0134391_103432

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium

3673

Open in IMG/M

Ga0134391_105043

All Organisms → cellular organisms → Bacteria

2433

Open in IMG/M

Ga0134391_107748

All Organisms → Viruses → Predicted Viral

1545

Open in IMG/M

Ga0134391_109632

Not Available

1231

Open in IMG/M

Ga0134391_118751

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Coriobacteriia → Coriobacteriales → Coriobacteriaceae → Collinsella

658

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0134391_100078	Ga0134391_100078111	F032312	MPKIKDYDEDLSAPKLLRERARDSKGRFIKKDLPPYLGAEQVLKPKNYYHFDSHGNYKGSSMNFDALVCLGFTWLKLLGVALMMLLWPIVFIYALHDGIEGYPFKKYAIPYIFILVAWFIIFLYGLVS*
Ga0134391_100078	Ga0134391_100078112	F060985	MSNIDEKAKNNFTIEMRIFENYEKVKHEIIKVIDFLRHAETNLGMCRIFDNQNHEFWHSVIKPWFKPERFGITHLWFSSGFSHIGYGEYHTIRGNRWLKTPIDKIDREDRIFGYWFPPYKKYIPHRIKVLKLALKDLERIKEEYGKD*
Ga0134391_100078	Ga0134391_10007814	F105375	MKNNETFQTTQHLDKLVTNLGLQIQGLFSLDLEEILDYSNNLMNLLVNAYVENQCLAISAMISKQDGFAIYSFLFQTPDTSNGAVDALVNFAMNFTDGEANIKSINRISSNIMQITFTV*
Ga0134391_100078	Ga0134391_10007816	F064817	MNIKNLFNRFRKREPELSYSLNLIYLEDTKVVFNQNIQCAKDLENYLSAYMGLFGMYSDKPYVLIYQEYKNRYWVYDKEPYLLYYKVPLIVNLSRKLSGKSDMVITKEKYQAVKDLVPAHEVSDRFKIPEYITGVFTDIWYKCQGYMDTDHVGLEEILELMQHNWLKEFELLVFKRNYDTDMLFLNHSLTYILDQTEEEGRRICIQNIIERNINQENQDENETI*
Ga0134391_100078	Ga0134391_1000785	F044555	MKTTNPSSRITLSQNGNQILTCKVYKEPNYILSMSNEEILELISGLDYMGSLPTVPDLEKPIEIQVSTTRQIPLEQNKEVQTKIKEIIYNNLYDTLIDELKGTISRFQAQYNIQEINPYLQDILQNPEDLVSLSQHHKR*
Ga0134391_103432	Ga0134391_1034321	F102167	IIDLDIMNEKMIDEYVAVLMIKSYDKITESYNLTTFSFHDKDMDGLRRLVSNAIMAVGLRNNPMTGDGNTAIK*
Ga0134391_105043	Ga0134391_1050432	F098313	IITVGLDYKTLCDRFENMEPEHEGKWGDEDDMDKEASFANLVRDRDDDDKFAILWNFSSDDDLIMRNICHESFHIAMSVCQFCNMSLGFKVGEDEHAAYIAGFAGDCVSEFINSKNTD*
Ga0134391_107748	Ga0134391_1077482	F064725	MGLQTVEVFVIQLAREGRLDFFCITDSNTYLCAKDLNMTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAIVKTSNKQAVLPSDFFDMLDAYRCEPLVCEIPGGDKAKADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITEKLYIGSHEVRFHYHHPVRLSIGRGLRRDCAADKYRDKYAWDNYDITISGNTMYTGFDGFIYIIYRATPKDDDGLPYIPETVLGYLEDYVETYIKMKIFENAAVNGLIQGAGDAYKLYAQQEPGKFARAMKELKMSMITLNDYRELAEDNRRRMLSYERMWPNAFDKYIKLI*
Ga0134391_109632	Ga0134391_1096322	F050794	MLYTSNYFVKVRQKQLLDHTYALSRDQAFDYMTEFNKRLSDKVGIKCTMDILLPTDDDNANIIIEHNGIIKKLMKEAEKLELDTDAIKAMMCDLLDELKDDIDLNILIFDVSQLLIKYNLFRLEAITEQEFKNSFVRMDS
Ga0134391_118751	Ga0134391_1187511	F099269	VGELLLLDDLGDRAGGASVLASATGDAGILVSDGSDVLELQNASGAGVDANATSDALVGINYGMSHGSFLSVDRRYRRCASV*

Scaffold ID

Protein ID

Family

Sequence

Ga0134391_100078

Ga0134391_100078111

F032312

MPKIKDYDEDLSAPKLLRERARDSKGRFIKKDLPPYLGAEQVLKPKNYYHFDSHGNYKGSSMNFDALVCLGFTWLKLLGVALMMLLWPIVFIYALHDGIEGYPFKKYAIPYIFILVAWFIIFLYGLVS*

Ga0134391_100078

Ga0134391_100078112

F060985

MSNIDEKAKNNFTIEMRIFENYEKVKHEIIKVIDFLRHAETNLGMCRIFDNQNHEFWHSVIKPWFKPERFGITHLWFSSGFSHIGYGEYHTIRGNRWLKTPIDKIDREDRIFGYWFPPYKKYIPHRIKVLKLALKDLERIKEEYGKD*

Ga0134391_100078

Ga0134391_10007814

F105375

MKNNETFQTTQHLDKLVTNLGLQIQGLFSLDLEEILDYSNNLMNLLVNAYVENQCLAISAMISKQDGFAIYSFLFQTPDTSNGAVDALVNFAMNFTDGEANIKSINRISSNIMQITFTV*

Ga0134391_100078

Ga0134391_10007816

F064817

MNIKNLFNRFRKREPELSYSLNLIYLEDTKVVFNQNIQCAKDLENYLSAYMGLFGMYSDKPYVLIYQEYKNRYWVYDKEPYLLYYKVPLIVNLSRKLSGKSDMVITKEKYQAVKDLVPAHEVSDRFKIPEYITGVFTDIWYKCQGYMDTDHVGLEEILELMQHNWLKEFELLVFKRNYDTDMLFLNHSLTYILDQTEEEGRRICIQNIIERNINQENQDENETI*

Ga0134391_100078

Ga0134391_1000785

F044555

MKTTNPSSRITLSQNGNQILTCKVYKEPNYILSMSNEEILELISGLDYMGSLPTVPDLEKPIEIQVSTTRQIPLEQNKEVQTKIKEIIYNNLYDTLIDELKGTISRFQAQYNIQEINPYLQDILQNPEDLVSLSQHHKR*

Ga0134391_103432

Ga0134391_1034321

F102167

IIDLDIMNEKMIDEYVAVLMIKSYDKITESYNLTTFSFHDKDMDGLRRLVSNAIMAVGLRNNPMTGDGNTAIK*

Ga0134391_105043

Ga0134391_1050432

F098313

IITVGLDYKTLCDRFENMEPEHEGKWGDEDDMDKEASFANLVRDRDDDDKFAILWNFSSDDDLIMRNICHESFHIAMSVCQFCNMSLGFKVGEDEHAAYIAGFAGDCVSEFINSKNTD*

Ga0134391_107748

Ga0134391_1077482

F064725

MGLQTVEVFVIQLAREGRLDFFCITDSNTYLCAKDLNMTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAIVKTSNKQAVLPSDFFDMLDAYRCEPLVCEIPGGDKAKADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITEKLYIGSHEVRFHYHHPVRLSIGRGLRRDCAADKYRDKYAWDNYDITISGNTMYTGFDGFIYIIYRATPKDDDGLPYIPETVLGYLEDYVETYIKMKIFENAAVNGLIQGAGDAYKLYAQQEPGKFARAMKELKMSMITLNDYRELAEDNRRRMLSYERMWPNAFDKYIKLI*

Ga0134391_109632

Ga0134391_1096322

F050794

MLYTSNYFVKVRQKQLLDHTYALSRDQAFDYMTEFNKRLSDKVGIKCTMDILLPTDDDNANIIIEHNGIIKKLMKEAEKLELDTDAIKAMMCDLLDELKDDIDLNILIFDVSQLLIKYNLFRLEAITEQEFKNSFVRMDS

Ga0134391_118751

Ga0134391_1187511

F099269

VGELLLLDDLGDRAGGASVLASATGDAGILVSDGSDVLELQNASGAGVDANATSDALVGINYGMSHGSFLSVDRRYRRCASV*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300014541: Human fecal microbial communities from obese patients in Germany - AS44_12

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences