Sample 3300014536

Overview

Basic Information
IMG/M Taxon OID	3300014536 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0121297 \| Gp0151542 \| Ga0134370
Sample Name	Human fecal microbial communities from obese patients in Germany - AS58_12
Sequencing Status	Permanent Draft
Sequencing Center	University of Hohenheim
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	79698411
Sequencing Scaffolds	6
Novel Protein Genes	8
Associated Families	8

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides salyersiae	1
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Human Fecal Microbial Communities From Obese Patients In Germany
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Obese Patients In Germany

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal distal gut

Location Information
Location	Germany
Coordinates	Lat. (^o)	N/A	Long. (^o)	N/A	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F032312	Metagenome / Metatranscriptome	180	N
F044555	Metagenome / Metatranscriptome	154	N
F055775	Metagenome	138	N
F060985	Metagenome / Metatranscriptome	132	N
F064817	Metagenome	128	N
F067844	Metagenome	125	N
F076064	Metagenome	118	N
F078693	Metagenome	116	N

Scaffold	Taxonomy	Length	IMG/M Link
Ga0134370_101236	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides salyersiae	7418	Open in IMG/M
Ga0134370_101341	All Organisms → cellular organisms → Bacteria	6898	Open in IMG/M
Ga0134370_101565	All Organisms → cellular organisms → Bacteria	5985	Open in IMG/M
Ga0134370_102263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	4249	Open in IMG/M
Ga0134370_105721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1835	Open in IMG/M
Ga0134370_108558	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	1266	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0134370_101236

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides salyersiae

7418

Open in IMG/M

Ga0134370_101341

All Organisms → cellular organisms → Bacteria

6898

Open in IMG/M

Ga0134370_101565

All Organisms → cellular organisms → Bacteria

5985

Open in IMG/M

Ga0134370_102263

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii

4249

Open in IMG/M

Ga0134370_105721

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes

1835

Open in IMG/M

Ga0134370_108558

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes

1266

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0134370_101236	Ga0134370_1012366	F055775	MAQIAQQDNLVIEVATTAAALDGDTKKKLIECIKGGTITDVILVTKEVDKKISHARVISWLVDTTGDSPKYTIDIINANSGKVEAIALN*
Ga0134370_101341	Ga0134370_10134112	F064817	MNIKNLFNRFRKREPELSYSLNLIYLEDTKVVFNQNIQCAKDLENYLSAYMRLFDMYSDKPYVLIYQEYKNRYWVYDKEPYLLYYKVPLIVNLSRKLSGKSDMVITKEKYQAAKALVPAHEVSDRFKIPEYITGVFTDIWYKCQGYMDTDHVGLEEILELMQHNWLKEFELLVFKRNYDIDMLFLTHSLTYILDQTEEEGRRICIQNIIERNINQENQDENETI*
Ga0134370_101565	Ga0134370_1015652	F044555	MKTTNPSSRITLSQNGNQILTCKVYKEPNYILSMSNEEILELISGLDYMGSLPTVPDLEKPIEIQVSTIRQIPLEQNKEVQTKIKEIIYNNLYDTLIDELKGTISRFQAQYNIQEINPYLQDILQNPEDLVSLSQHYKR*
Ga0134370_101565	Ga0134370_1015658	F060985	MSNIDEKAKNNFTIEMRIFENYEKVKYEIIKVIDFLRHAETNLGMCRIFDNQNHEFWHSVIKPWFQPERFGITHLWFPSGFSHIGYGEYHIIRGNRGLKTPIDRINREDYIFGYWFPTYKKYIPYRIRILKLALKDLERIKEEYGKD*
Ga0134370_101565	Ga0134370_1015659	F032312	MARIKDYDEDLSAPKLLRERARDSKGRFIKKDLPPYLGAEQVLKPKNYYHFDSQGNYKGSSMNFDAMVLLGFTWFKLLGVALMMLLWPLVFIYALNDGIERYPFKKYAIPYIFILVVWFIVFLYGLVS*
Ga0134370_102263	Ga0134370_1022636	F078693	MVLALVRGAERFYVKWNCSLLMSKENQKTTSDFDALDPRERGCSPLSDPKGVVEA
Ga0134370_105721	Ga0134370_1057213	F067844	MNTLAAETASAWYLILNRKLKTLPIYITQLSSHLPRPLTMGTQQVSAG
Ga0134370_108558	Ga0134370_1085584	F076064	SFHATTEEAKRPDELYMRKLLPELTRLKLQPRHVVANDEAYYAVMKGVMLFTPEAEKLMLTEDYFSARRQIRLCAPDLKRRNETRRHPMPVLKLY*

Scaffold ID

Protein ID

Family

Sequence

Ga0134370_101236

Ga0134370_1012366

F055775

MAQIAQQDNLVIEVATTAAALDGDTKKKLIECIKGGTITDVILVTKEVDKKISHARVISWLVDTTGDSPKYTIDIINANSGKVEAIALN*

Ga0134370_101341

Ga0134370_10134112

F064817

MNIKNLFNRFRKREPELSYSLNLIYLEDTKVVFNQNIQCAKDLENYLSAYMRLFDMYSDKPYVLIYQEYKNRYWVYDKEPYLLYYKVPLIVNLSRKLSGKSDMVITKEKYQAAKALVPAHEVSDRFKIPEYITGVFTDIWYKCQGYMDTDHVGLEEILELMQHNWLKEFELLVFKRNYDIDMLFLTHSLTYILDQTEEEGRRICIQNIIERNINQENQDENETI*

Ga0134370_101565

Ga0134370_1015652

F044555

MKTTNPSSRITLSQNGNQILTCKVYKEPNYILSMSNEEILELISGLDYMGSLPTVPDLEKPIEIQVSTIRQIPLEQNKEVQTKIKEIIYNNLYDTLIDELKGTISRFQAQYNIQEINPYLQDILQNPEDLVSLSQHYKR*

Ga0134370_101565

Ga0134370_1015658

F060985

MSNIDEKAKNNFTIEMRIFENYEKVKYEIIKVIDFLRHAETNLGMCRIFDNQNHEFWHSVIKPWFQPERFGITHLWFPSGFSHIGYGEYHIIRGNRGLKTPIDRINREDYIFGYWFPTYKKYIPYRIRILKLALKDLERIKEEYGKD*

Ga0134370_101565

Ga0134370_1015659

F032312

MARIKDYDEDLSAPKLLRERARDSKGRFIKKDLPPYLGAEQVLKPKNYYHFDSQGNYKGSSMNFDAMVLLGFTWFKLLGVALMMLLWPLVFIYALNDGIERYPFKKYAIPYIFILVVWFIVFLYGLVS*

Ga0134370_102263

Ga0134370_1022636

F078693

MVLALVRGAERFYVKWNCSLLMSKENQKTTSDFDALDPRERGCSPLSDPKGVVEA

Ga0134370_105721

Ga0134370_1057213

F067844

MNTLAAETASAWYLILNRKLKTLPIYITQLSSHLPRPLTMGTQQVSAG

Ga0134370_108558

Ga0134370_1085584

F076064

SFHATTEEAKRPDELYMRKLLPELTRLKLQPRHVVANDEAYYAVMKGVMLFTPEAEKLMLTEDYFSARRQIRLCAPDLKRRNETRRHPMPVLKLY*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300014536: Human fecal microbial communities from obese patients in Germany - AS58_12

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences