3300013121: Activated sludge microbial communities from Jimei wastewater treatment plant (WWTP), Xiamen City, Fujian province, China

Overview

Basic Information

• IMG/M Taxon OID: 3300013121
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0127561 | Gp0197873 | Ga0172278
• Sample Name: Activated sludge microbial communities from Jimei wastewater treatment plant (WWTP), Xiamen City, Fujian province, China
• Sequencing Status: Permanent Draft
• Sequencing Center: Beijing Novogene Bioinformatics Technology Co., Ltd
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 167292447
• Sequencing Scaffolds: 15
• Novel Protein Genes: 19
• Associated Families: 17

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	9
Not Available	3
All Organisms → cellular organisms → Bacteria → Proteobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Activated Sludge Microbial Communities From Jimei Wastewater Treatment Plant (Wwtp), Xiamen City, Fujian Province, China
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Activated Sludge Microbial Communities From Jimei Wastewater Treatment Plant (Wwtp), Xiamen City, Fujian Province, China

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Jimei WWTP, Xiamen City, Fujian province
• Coordinates
  • Lat. (^o): 24.25
  • Long. (^o): 117.57
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001360	Metagenome / Metatranscriptome	714	Y
F002465	Metagenome / Metatranscriptome	557	Y
F005964	Metagenome / Metatranscriptome	385	Y
F006066	Metagenome / Metatranscriptome	382	Y
F012261	Metagenome	282	Y
F013427	Metagenome / Metatranscriptome	271	Y
F020435	Metagenome	224	Y
F027123	Metagenome / Metatranscriptome	195	Y
F044437	Metagenome / Metatranscriptome	154	Y
F051169	Metagenome / Metatranscriptome	144	Y
F056039	Metagenome / Metatranscriptome	138	Y
F057967	Metagenome / Metatranscriptome	135	Y
F075009	Metagenome / Metatranscriptome	119	Y
F076269	Metagenome / Metatranscriptome	118	N
F083856	Metagenome	112	Y
F103060	Metagenome	101	Y
F105218	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0172278_1047	All Organisms → cellular organisms → Bacteria	121412
Ga0172278_1063	All Organisms → cellular organisms → Bacteria	101483
Ga0172278_1085	Not Available	231459
Ga0172278_1130	All Organisms → cellular organisms → Bacteria → Proteobacteria	135501
Ga0172278_1294	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	124452
Ga0172278_1298	Not Available	134440
Ga0172278_1306	All Organisms → cellular organisms → Bacteria	102974
Ga0172278_1357	All Organisms → cellular organisms → Bacteria	175899
Ga0172278_1393	All Organisms → cellular organisms → Bacteria	145179
Ga0172278_1470	Not Available	354091
Ga0172278_1561	All Organisms → cellular organisms → Bacteria	232355
Ga0172278_1607	All Organisms → cellular organisms → Bacteria	136908
Ga0172278_1746	All Organisms → cellular organisms → Bacteria → Proteobacteria	171046
Ga0172278_1790	All Organisms → cellular organisms → Bacteria	236497
Ga0172278_1885	All Organisms → cellular organisms → Bacteria	179479

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0172278_1047	Ga0172278_104719	F056039	MPTPVLPWNCPNPYCEEPHNPASVPVGGLIKCRSCGWERKIRAPEPENLDDWPGLFTPVEPTKG*
Ga0172278_1047	Ga0172278_104727	F051169	VSAEVAAACECTHEPPHRFTIAGRARVRGGVLLTLRRVDEPYPPRDVFVTNRELKMGSDNVFKACFVCVDRGFRETAIALPKSDVELGLPPA*
Ga0172278_1047	Ga0172278_104775	F012261	VRRALAFLGSAFFVFYCTAVGVYLVLRPWTGRAAHPGIFGSGFFRGFVSGLGLLHLAAGAADLKALSRTLQGDPPPEASE*
Ga0172278_1063	Ga0172278_106354	F002465	MPTSKPPKPDPNQELTERRIAEFAVEESRLSAVAYRFQLVPRERVWKNWDRTEFEPNHFQVVGLAGVCLNRDEIEKAERIASRALEEVDGILFTVEDPADSIVVRGVTGTMEFVRTPTLCAEIMAGSTGAFDRALAALGAAFPGDRVAGKIVSESK*
Ga0172278_1063	Ga0172278_106364	F006066	MRRRPGEAPPTHRVWLSNEQPMREGPSPDGRQYFRIRFDNEPSPEWMRAYRAGLLGLMPEDRDAVLRFEFQGDSVRFVAADAEVAKLRRVLEQRVQAVNGILSGGRAVEP*
Ga0172278_1085	Ga0172278_1085296	F001360	MSLAKFRKVYGKTNSGRFVVSEGNAVSAYLLPHPGLPTWYKDTEDDRFETVIPKGTILSVVADSNGDSRIVPANGSASAFVWQDDTSTASGLYSTTMEETGATPATYGGSTADYISVPARSVPVGCAQYDLLRPFDKGTSQGAGTIRQGYVEWPLISGVNGDLAVGDLVRSDHMGRPVKCATTDLYNSSNVYAYLVVGKVIEVEKFATNFDDGLLSYMQLPSDPGGLKDVYSILRTGTYQGKLGIRNNLDVANALGAVRVALTL*
Ga0172278_1130	Ga0172278_113061	F075009	MGDDDPKHPSSPAGTTALARPMIARDLDKAGKGQLVYVGRDGEVRDPSGVRNRQYAAYLAFGGITTAGVALAATSFPLLIPFYVLLGGRFLGTIRAVKRVNEASVALSNGDSVAGRALAEPVARAWWAPGRVRALAELRVAIADALDGKGEIALDKVRKARAKLSPRLVQHQFSYYTEINLLAALGRTKEARNLLDSRGPIPTGEVLKLSYWIAQMHLWVAEGEAPKPDKLDEGELHERMRKGLSMTAGRDLLLLCAWLYAQRGEHDDARFAWRQAMDREGSMRLEVAMPKLAEWMTAYKAEHPELDAPEPDDEI*
Ga0172278_1294	Ga0172278_1294111	F020435	MTMTDLVSALSPAQYTELALGLFLAVYVAVVIRHGGKRRAAEHTACAQLPLADDAGELR*
Ga0172278_1298	Ga0172278_129864	F044437	MNLKEKLILTSLCVGFFGDALLQLLVSQTTLGGTTGWGLKEYFKQHGRAESLTIAAGMMAIFYAIYLYVLHLPLTWYYLAAYGIVLDLLFRQFMIFPSLKGYYAHLNYFWSAFWGAIPILLVYWIAKRWEDSE*
Ga0172278_1306	Ga0172278_13064	F027123	MATVKRYNIHCPKCQHNFPIFASLHHSIDIDGWIKDKAENHDCKAYADQLAKERAPRALNPIKASKKGK*
Ga0172278_1357	Ga0172278_135736	F083856	VQSLLRSEIEDRFAGARVADHGTRTHAEVTWDGTLYRTRLEMEPVGRVVVSIPSTDGFELLLRWNDRHTTNDGPRAPSFDDSFLIETNDLALAGAWIDRDAREALLASRYVSSKHAERDTAQLIRDGAWQHEVSNDEVIARRRDDEPSVTRMVDMLLVSLLLAGRPVRWARTFATHGRALGGELASRIDVGGKPILRVRRGAVDVVVRLVRRLGPGDPGRLRTMVSAHRHGSGGETLSLIAEGLPRAAWPPPTDPSTGTLTIDARARQLLDVARPSTTMVRRHDVEIAFDGGHVERERLGAAIELAAWWAGDTRGQGPYR*
Ga0172278_1393	Ga0172278_139378	F076269	MTFLLWLFFTALAVGIPPAFIARQLTKGRGQYVEIPGKAVTWGVGSFLLAYLAVTVPWLIISWTGLIGAPWLFTGLILGAPASAWASKKWYRAMKDGSLPGGGSNKYLP*
Ga0172278_1470	Ga0172278_147087	F103060	MAILSPADLPSIMKVRSEPMKKYVLSKLGYPNVDVEISEDQWEVIWKVAGDFIAHYFPREQKLAVFYTSPLKPTYPFPKDAYWIQSVNWDPVTSRIDDVFGAESFLFNVGNISGIQNILLDYHLLAAYRKFSQKILGTEGHWEVINEGTSTVEGDSLSSKDQLIRLYPTPKGAFPVVVLYIPVVNYFRSPQARQLAYDLMLAEARIAVGSARSKISGMPTPDGGGINYDGSDLVQMGEQAKEKIIETAMNLGEPLMVHMW*
Ga0172278_1561	Ga0172278_1561100	F105218	MRTSRKLTHALLAVFTLVVMSSFALAADPGLQYPPTSEVSDQKAGSVLIYNIYSSGATSGNTENTRINITNTSSQRAAFVHLYFVSNGCSIADSYICLTANQTASFLTSDVDPGVKGYIVAVAVDGVLGCPIRFNWLIGDEYVKLASGHAANLGAEAFAAVWTAAEGEGEVARVPGCDPNSVTATINFDGVQYNRVPAVLALSNLPSRADGNDTMIIINRIGGNLGIGASTLGSLFGLLYDDAENVLSFSVTGGCQLMASISNNFPRTTPRVETFIPAGRSGWMKIYNQTGAIGILGAFINKNDNAGASAGAFNGGSNLHKLTLTPTSTYTVPVFPPSC*
Ga0172278_1561	Ga0172278_156199	F105218	MSSFALAADPGLLYPPTSEASDQKAGSLLFYNVYSSGATSGNTENTRINITNTSVTSAAFVHLYFVSNGCSIADSYICLTATQTASFLASDVDPGVKGYIVAVAVDGVLGCPVAFNWLIGDEYIKLASGHAANLGAVAFSALYNGIVPGCDANSVTATINFDGAGGYNRTPAVLALSNLPSRADGNDTMVIINRVGGNLGIGASSLGSLFGLLYDDAENVLSFSVTGGCQLMASISNNFPRTTPRVETFIPAGRSGWMKIYNQTGAIGILGCAINKNDNAGASAGAFNGGHNLHHLTLNNTMSYIVPVFPPSC*
Ga0172278_1607	Ga0172278_160710	F005964	MIVHQSTSILKGLKTMSNRSRLALLCLLLTVCFGVAPAQTQEARTSQAKDQGPDISGQWTGTWGIYSPAQGSTPPKDICKKLDAMVENKDGVWQASFEGDCGGAYKYSIKMEGRQVGKVVMFKGTTDLGAKDGGVFDWIGRATEKEFVGFFTSAFYTGTFNLARPRKEQTQ*
Ga0172278_1746	Ga0172278_174646	F057967	MNRDAKTQSSLIALARTRRMQRALAHAYLHRGAPMPTLRSSLGYMTTTACVADRSPAELDGHRMVVLGLARAEGFAYVLEELGGDEAPIVYRLWLSGPRQGHLVPIHAWYEHDHSAREIRARITAIARTLEPATLSTCEAWMLSTRIVQRRALRVAGPCADLPIRKFALQLSVEPVSGLGPSGKTTVTAFLRPQAQLREVWTLTNSHAIARVSYIGIPNGLGLAKDTMILLTAGLADEDLGETA*
Ga0172278_1790	Ga0172278_1790174	F105218	MENQFTFSLLREFQRITSHKKALAGISKLTKREIVMRNTHLLTKTLLALFALVVMSAFALGADPGLTYPPTSEASDQKAGSLLFYNIYTSGATDGTTQNTRINITNTSTTSAAAVHLFFVSDGCSIADSFICLTANQTASFLTSDIDPGITGYIVAIATDQDGIPLLHNFLIGDEYVKFTSGHVANLGAVAFAKLNNANVLSTDGSLAALFFDGVNLAGSYNRVPRVLAADNIPSRADGNDTMVIINRVGGNLGIGAASLGTLFGIFYDDAENALSFSVTGGCQLRNTLSNNFPRTAPRLETFIPAGRSGWFKVYSQSDIGILGAMINSNPNAAASAGAFNGGHNLHALTNSAAANYVIPIFPPSC*
Ga0172278_1885	Ga0172278_188563	F013427	VQQPEESSTITPATADERIPISFAGTCDLAIWCKLLRDKGWTGPRIARALGRSEGYVNNLIRVVDRASPVVMLRWREEQSGELVAVCATDWLVQICLLPHDKQNEELARRVGSAG*