NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300012978

3300012978: Hot spring water viral communities from Western Cape, South Africa - Brandvlei



Overview

Basic Information
IMG/M Taxon OID3300012978 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0126268 | Gp0177339 | Ga0157393
Sample NameHot spring water viral communities from Western Cape, South Africa - Brandvlei
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of the Western Cape
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size11115694
Sequencing Scaffolds3
Novel Protein Genes3
Associated Families3

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2
All Organisms → cellular organisms → Bacteria1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameHot Spring Water Viral Communities From Western Cape, South Africa
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Hot Spring Water → Hot Spring Water Viral Communities From Western Cape, South Africa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)aquatic biomehot springspring water
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationWestern Cape, South Africa
CoordinatesLat. (o)-33.732496Long. (o)19.413317Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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