NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300012286

3300012286: Freshwater microbial communities from Ausable River, Ontario, Canada - S47



Overview

Basic Information
IMG/M Taxon OID3300012286 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0121696 | Gp0175713 | Ga0157137
Sample NameFreshwater microbial communities from Ausable River, Ontario, Canada - S47
Sequencing StatusPermanent Draft
Sequencing CenterMolecular Research LP (MR DNA)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size25345883
Sequencing Scaffolds76
Novel Protein Genes98
Associated Families86

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available30
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage22
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1
All Organisms → Viruses → Predicted Viral14
All Organisms → Viruses1
All Organisms → cellular organisms → Bacteria4
All Organisms → Viruses → environmental samples → uncultured virus1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium1
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameFreshwater Microbial Communities From Rivers And Streams Along An Organic Matter Gradient Associated With Agriculture In Ontario, Canada
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Freshwater Microbial Communities From Rivers And Streams Along An Organic Matter Gradient Associated With Agriculture In Ontario, Canada

Alternative Ecosystem Assignments
Environment Ontology (ENVO)freshwater river biomeriverriver water
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationAilsa Craig, Ontario
CoordinatesLat. (o)43.22713Long. (o)-81.5225Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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