Sample 3300011306

3300011306: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S23 DCM_B metaT (Metagenome Metatranscriptome) (version 2)

Overview

Basic Information
IMG/M Taxon OID	3300011306 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114292 \| Gp0127479 \| Ga0138371
Sample Name	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S23 DCM_B metaT (Metagenome Metatranscriptome) (version 2)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	67667272
Sequencing Scaffolds	63
Novel Protein Genes	75
Associated Families	64

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria	2
Not Available	28
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	8
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Eukaryota → Eukaryota incertae sedis → Picozoa → unclassified Picozoa → Picobiliphyte sp. MS584-11	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Lipsvirus	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → cellular organisms → Eukaryota → Sar	1
All Organisms → Viruses	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED167	3
All Organisms → cellular organisms → Eukaryota → Haptista	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.	1
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae → Trypanosoma → Schizotrypanum → Trypanosoma cruzi	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Southern Atlantic ocean
Coordinates	Lat. (^o)	-28.2362	Long. (^o)	-38.4949	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000020	Metagenome / Metatranscriptome	6197	Y
F000023	Metagenome / Metatranscriptome	5736	Y
F000254	Metagenome / Metatranscriptome	1450	Y
F000351	Metagenome / Metatranscriptome	1248	Y
F000802	Metagenome / Metatranscriptome	885	Y
F001026	Metagenome / Metatranscriptome	802	Y
F001479	Metagenome / Metatranscriptome	687	Y
F002185	Metagenome / Metatranscriptome	585	Y
F002490	Metagenome / Metatranscriptome	554	Y
F003333	Metagenome / Metatranscriptome	493	Y
F003869	Metagenome / Metatranscriptome	464	Y
F005668	Metagenome / Metatranscriptome	393	Y
F005670	Metagenome / Metatranscriptome	393	Y
F005911	Metagenome / Metatranscriptome	386	Y
F007173	Metagenome / Metatranscriptome	356	Y
F009691	Metagenome / Metatranscriptome	314	Y
F010769	Metagenome / Metatranscriptome	299	Y
F013767	Metagenome / Metatranscriptome	268	Y
F014070	Metagenome / Metatranscriptome	266	Y
F014386	Metagenome / Metatranscriptome	263	Y
F014748	Metagenome / Metatranscriptome	260	N
F019484	Metagenome / Metatranscriptome	229	Y
F019655	Metagenome / Metatranscriptome	228	Y
F022419	Metagenome / Metatranscriptome	214	N
F022892	Metagenome / Metatranscriptome	212	Y
F023367	Metagenome / Metatranscriptome	210	N
F025972	Metagenome / Metatranscriptome	199	N
F028188	Metagenome / Metatranscriptome	192	N
F028816	Metatranscriptome	190	Y
F038718	Metagenome / Metatranscriptome	165	Y
F040635	Metagenome / Metatranscriptome	161	Y
F041790	Metagenome / Metatranscriptome	159	N
F043449	Metagenome / Metatranscriptome	156	N
F045808	Metagenome / Metatranscriptome	152	N
F047718	Metagenome / Metatranscriptome	149	N
F049704	Metagenome / Metatranscriptome	146	N
F051931	Metagenome / Metatranscriptome	143	N
F056635	Metatranscriptome	137	N
F057762	Metagenome / Metatranscriptome	136	Y
F060931	Metagenome / Metatranscriptome	132	N
F063612	Metatranscriptome	129	Y
F064350	Metagenome / Metatranscriptome	128	Y
F064768	Metagenome / Metatranscriptome	128	Y
F065449	Metatranscriptome	127	Y
F067700	Metagenome / Metatranscriptome	125	N
F068935	Metagenome / Metatranscriptome	124	N
F070163	Metagenome / Metatranscriptome	123	Y
F071278	Metagenome / Metatranscriptome	122	N
F073492	Metagenome / Metatranscriptome	120	N
F073591	Metagenome / Metatranscriptome	120	N
F074431	Metagenome / Metatranscriptome	119	Y
F075316	Metagenome / Metatranscriptome	119	N
F077350	Metagenome / Metatranscriptome	117	Y
F078662	Metagenome / Metatranscriptome	116	N
F080161	Metagenome / Metatranscriptome	115	N
F080828	Metatranscriptome	114	Y
F082630	Metagenome / Metatranscriptome	113	N
F088935	Metagenome / Metatranscriptome	109	N
F088982	Metagenome / Metatranscriptome	109	N
F090441	Metatranscriptome	108	N
F092219	Metagenome / Metatranscriptome	107	N
F095621	Metagenome / Metatranscriptome	105	N
F099360	Metagenome / Metatranscriptome	103	N
F101226	Metagenome / Metatranscriptome	102	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0138371_1005636	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
Ga0138371_1006241	Not Available	616	Open in IMG/M
Ga0138371_1006685	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	595	Open in IMG/M
Ga0138371_1007355	Not Available	592	Open in IMG/M
Ga0138371_1008884	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	612	Open in IMG/M
Ga0138371_1008943	All Organisms → Viruses → Predicted Viral	1550	Open in IMG/M
Ga0138371_1013099	All Organisms → cellular organisms → Eukaryota → Eukaryota incertae sedis → Picozoa → unclassified Picozoa → Picobiliphyte sp. MS584-11	521	Open in IMG/M
Ga0138371_1015209	Not Available	951	Open in IMG/M
Ga0138371_1018021	Not Available	925	Open in IMG/M
Ga0138371_1019894	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	603	Open in IMG/M
Ga0138371_1022291	Not Available	565	Open in IMG/M
Ga0138371_1029194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1092	Open in IMG/M
Ga0138371_1029261	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Lipsvirus	529	Open in IMG/M
Ga0138371_1030314	Not Available	573	Open in IMG/M
Ga0138371_1030706	Not Available	590	Open in IMG/M
Ga0138371_1030853	Not Available	573	Open in IMG/M
Ga0138371_1031789	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	509	Open in IMG/M
Ga0138371_1032674	All Organisms → cellular organisms → Eukaryota → Sar	501	Open in IMG/M
Ga0138371_1035387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	715	Open in IMG/M
Ga0138371_1035523	All Organisms → Viruses	652	Open in IMG/M
Ga0138371_1038327	Not Available	644	Open in IMG/M
Ga0138371_1042068	Not Available	945	Open in IMG/M
Ga0138371_1042207	Not Available	971	Open in IMG/M
Ga0138371_1046352	Not Available	746	Open in IMG/M
Ga0138371_1050015	Not Available	520	Open in IMG/M
Ga0138371_1050219	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	844	Open in IMG/M
Ga0138371_1052804	Not Available	825	Open in IMG/M
Ga0138371_1053363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED167	1333	Open in IMG/M
Ga0138371_1055236	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	543	Open in IMG/M
Ga0138371_1056162	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
Ga0138371_1056481	All Organisms → cellular organisms → Eukaryota → Haptista	551	Open in IMG/M
Ga0138371_1060203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
Ga0138371_1060370	Not Available	894	Open in IMG/M
Ga0138371_1061511	Not Available	754	Open in IMG/M
Ga0138371_1066322	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	691	Open in IMG/M
Ga0138371_1070621	All Organisms → cellular organisms → Archaea	949	Open in IMG/M
Ga0138371_1070780	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	557	Open in IMG/M
Ga0138371_1070894	Not Available	567	Open in IMG/M
Ga0138371_1074384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	661	Open in IMG/M
Ga0138371_1075852	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	2898	Open in IMG/M
Ga0138371_1077406	Not Available	506	Open in IMG/M
Ga0138371_1078219	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.	876	Open in IMG/M
Ga0138371_1084797	Not Available	582	Open in IMG/M
Ga0138371_1085595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED167	2196	Open in IMG/M
Ga0138371_1087841	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Lipsvirus	603	Open in IMG/M
Ga0138371_1088396	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	738	Open in IMG/M
Ga0138371_1089016	Not Available	954	Open in IMG/M
Ga0138371_1089368	Not Available	538	Open in IMG/M
Ga0138371_1093487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED167	1860	Open in IMG/M
Ga0138371_1097812	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	588	Open in IMG/M
Ga0138371_1101884	Not Available	551	Open in IMG/M
Ga0138371_1103659	Not Available	549	Open in IMG/M
Ga0138371_1108986	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	603	Open in IMG/M
Ga0138371_1110987	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	776	Open in IMG/M
Ga0138371_1112017	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	643	Open in IMG/M
Ga0138371_1112771	Not Available	727	Open in IMG/M
Ga0138371_1113493	All Organisms → cellular organisms → Eukaryota → Opisthokonta	831	Open in IMG/M
Ga0138371_1123828	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
Ga0138371_1131675	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae → Trypanosoma → Schizotrypanum → Trypanosoma cruzi	588	Open in IMG/M
Ga0138371_1132276	Not Available	524	Open in IMG/M
Ga0138371_1132581	Not Available	732	Open in IMG/M
Ga0138371_1133158	Not Available	712	Open in IMG/M
Ga0138371_1133272	Not Available	911	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0138371_1003520	Ga0138371_10035201	F060931	ETMIEDTASSHEAIVAGRKGVYLFKRLVLGARKGTADYVAAVFRWSKGAVQLSWTSFWFPLHRYLYPWLVLFFVVAPIMATVIYFQSTRLDHCHRTKYSADMWKKVGVDEEWCRLGPTVGLISDPIFVCYGVYMVLMSIASFNNPRIGANLIMFENITYFFSSQTAYFWLAIPCVMTMAPDPSALTYDAVTLTIGGLWVEVHMNYIYGHIAAWAPLENNQAPDKLGLLRAQQMFFVTAPLHTLAIFQGTQDSWKILFAAKDASR
Ga0138371_1005636	Ga0138371_10056361	F092219	YYFLTPIWSTTMKKFITALAATFATVVIGSVASAATHTFNVYHEEVFPALVEANAPATFSVYHEEVLPALVAANTPPTFNVVREEILPAMNRAVASMPVTSSDVYGDIVYHEEVVPMSAPATFAEVYGDIIYHEEVALTADADPFSEEIVGGLGPQLPYNPMQGVDYGFVQAFLQQNADPFSEEIVGGLGPQINFVVSN*
Ga0138371_1006241	Ga0138371_10062411	F019484	FYFLTILGGSLKKIAKKITTKVPISKNVYTNASIF*
Ga0138371_1006685	Ga0138371_10066851	F101226	TRLAATPSGAERTRVRVLDHHLGGIMLGLDRVGGFLEAIAALEPKKIKSDKFQYPKTMSDPDWDGSISINTYTDYSTLYGPFTVHSYHEEWDSGTDIYATDAETGKDLMGYIVQCMRASGRYRGELFDTDDGDREDSERLREMDEVEADYAGLGKFYPGTIARDHGDGTYDIVYPWYEDGARVRETRVAERLIRKLGV
Ga0138371_1007355	Ga0138371_10073551	F013767	QGSSFDLHLATPMSVRAIYYFVAGFAGLFAMQGCGGGSTTAAAAATTASP*
Ga0138371_1008884	Ga0138371_10088841	F014386	KHFARGTTEITMANVEAAAQPFKCKVNENMKSMELPILRLTGTVKENPHMRAFWASTCSFFIAFVGWFALAPVAVDVMYSIGQCENQLYKVADHPTRKAFVTFKDIKTKEPYCVHGIVEDKSDCKEIPAAEADIKACEDASSEECTFAKANKYDLTTLPKCVCGKGTGCKTIIANAGIASVGSTVFVRISLGTLLERFGPVNVQ
Ga0138371_1008943	Ga0138371_10089431	F049704	HQKAHITIIKDMTDHYYYYEAVMGTGKKIHLFARDDIEAAYRATHIAKWHWKTTLTDIYLDKHHHYNEERISKQLQHDKELPS*
Ga0138371_1011291	Ga0138371_10112912	F088935	MTSIGGLDVAYGARMQVVRTNVMCLALADTGLANATTVPKFILNTYKEALKGTVIEPDFLYIYEIADMDGSGYTTAAVANGLFNQDNSGDGTA
Ga0138371_1013099	Ga0138371_10130991	F028188	LHSVLLNDSFALDFICATPLEQFQILPLSAQVYPASASISSLEVCNLFPQVSTDSEFVYMSGAGLTAKLTS*
Ga0138371_1015209	Ga0138371_10152091	F090441	WELATLSFLDSLALGALITRRAIIGCQFPDAVSYRKNDCNMFRSHSET*
Ga0138371_1018021	Ga0138371_10180211	F090441	LNLLALGAFITRRVIVGCQFPDAVLHRKNDCNVFRSHSET*
Ga0138371_1019894	Ga0138371_10198941	F073591	LLEPLRTNTRTDVQRPTRRSQITDAPRRTKKMWTWRALLLSGAVGVSVANILTVIVAYDEVRFPHQMISDYVATAPGAAVANWAWPLFILSHALFEARLFHRIKQHKAKAPQAYQYWVYSLYGLVAGWLSMVLCLVFDIRSCPREHSVLGGLYGGAWLLGQSLRCTIDDQREKLGLAKAPRLAQTRLALCALEAATAPFLV
Ga0138371_1022291	Ga0138371_10222911	F065449	LAALQKAKEILAEKTGGATARAYSFMQIATASELRTSTKNDQLKDRVLALVQGMADKDGSKMLSLLAERLRSASLMGADPFAKVKGMIQEMIEKLVEEAQKEASHKAFCDKEMSETKAKRDDKQSDLDDLHTKIDKATSKIAKLKEDAEGTTKELAAIVEYWDKLQPMCVAKPESYAERKKRREAEIA
Ga0138371_1029194	Ga0138371_10291941	F099360	RRSGEAANTPCSKHNEMRTSKGRQLLVECGVIALGAILALPWGLNPAIAWVLGGLTLLGALTAQRAWSERKPDRVGQSLLAKWLVIALGFSGVFSWWNAVPLAALILGALAVNLASPISAAIVAMSRRKY*
Ga0138371_1029261	Ga0138371_10292612	F009691	MKTTLNSKEYVTFARRFVKETVATMDIEELRGIVTDHIHEMIQEGENTYGQEGAFDEMMSWDEDVFLNVAKDFELEFEGV*
Ga0138371_1030314	Ga0138371_10303141	F005911	IAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQALKAKIDGADINQARLGSGTEDDLEAPIDDVFHNGKFISLKVMVKKAIIIAADDPTATARAGSDMPYDLENSGVLIKYADADGNVIAATDTGSGTDTIVADVQLFVNLAGTPDANSNSPYTDGDPFYYILMETANSGLAADDITVNLVQFPAGIL
Ga0138371_1030706	Ga0138371_10307061	F074431	SIVDWEGRTGVLMNQDAGGFSDIYQSINTVPGTVYSVSYDVWATPIMNTAGNEYCTSTDSNGLMAITSGAVQMGCGEADGHCDHGEETICPDVDGGWTTVTGTYTATGVASTFRLHGESGFDAYFDSVSIMGPCVAGQMNIVVNGDLNGPVVDNTISGWNTHNCVVSIVDWEGETGVLKNQDAGGFSDVYQSINTV
Ga0138371_1030853	Ga0138371_10308531	F005911	IAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQALKAKIDGADINQARLGSGTEDDLEAPIDDVFHNGKFISLKVMVKKAIIIAADDPTATARAGSDMPYDLENSGVLIKYADADGNVIAATDTGSGTDTIVADVQLFVNLAGTPDASSNSPYTDGDPFYYILMETANSGLAADDITVNLVQFPAGIL
Ga0138371_1031789	Ga0138371_10317891	F040635	VRHEDIPDINNPKTMKAILEGDKLMKEVLNGGYNVHPVPPPNSETK
Ga0138371_1032674	Ga0138371_10326741	F019655	ASKLQKAAEDKGDLADTTATRDADQTYLDDLVAECTQKSSDFEQRQQLRTDELAAIETAIEILSSGAVSGNADKYLPSFVQKKTSVSFLQLSVGSKNPSQARVAEFLREKGSAINSRVLSALAVRVAEDPFVKVKKMIKDLIVRLMEEANEEAEHKGWCDTELSTNE
Ga0138371_1035387	Ga0138371_10353871	F095621	MDKEKEECITQIENHYCQRLTELVDMKMFDEAHAIFEEFSLGDDESYQWFFIKFEDDGTESLSIDDQTNR*
Ga0138371_1035523	Ga0138371_10355233	F002185	MVKGKLERKYRLIHNGRELSQGLLSEAGKYDAMQILVQRFDEGREDAIDPDEVEIIDVTQEKS*
Ga0138371_1038327	Ga0138371_10383272	F001479	MSKEMLFLCDVYDAWLSKNKLPHRCASEILYGVDTKGKLTANQSYWLESFISTWDVIAQNT*
Ga0138371_1038327	Ga0138371_10383273	F007173	MQTITKAKIKRDNLMDYIHEDRDLLMGLQDDLSDMLSATGRYSITLDEIVQNYMPFIPLYLIENEDEIKQAYPDRVTDDEYIFIYDR
Ga0138371_1042068	Ga0138371_10420681	F090441	LATLSFPDSLALGALITRRVIVGCQFPDAALNRKNDCDTFRFHSGT*
Ga0138371_1042207	Ga0138371_10422071	F090441	EDFIKGEVWELATLSFLDSLALGAPITRRVIIGCQFPDAASYRKNDSDMFRSHSGT*
Ga0138371_1046352	Ga0138371_10463521	F003333	MGSNRTFCIQQMGKPQKEKKVGDRYNVLRKGKVIFWNVSESELFDIMEDLAVECYYNKSLTSQDITYEPYIEEPLDNG*
Ga0138371_1048293	Ga0138371_10482931	F000020	NTQTIKDSQEAQTAVSQAVTVLKEFYEKAGEATALIQEKKQKPEIFDEPYTGMQSENGGVLGMLEVIASDFARLETDTKAAEAEAQSAFDKFSSESAVNRAANAKDVEHKTTKKTNQESALTAKKADLEGTQKELDAALAYYDKLKPSCVDAGVSYEDRVARRKEEIESLQEALRILNGEDIAFLQK*
Ga0138371_1050015	Ga0138371_10500151	F014070	MGLFGIVRAEETAVEVPEGITISGELSTDITFGDATTFVSPYTGLTLSGDGWVVSTNLSDGMVNIEEAKYSWNVVDGVILTFGSQAEPYGLAWGLHRPSTNWFVSTPRDHSVTNGIGVGLNKWGVGANLLWGGDSVDEE
Ga0138371_1050219	Ga0138371_10502191	F001026	MVMAKHTLELDDLELTALITHLEGQSEMMVESRLNCSNPRELPDREEVLLNLVYAKAFTIGWDAHINPKVDFNLHQNEDRIFKYK*
Ga0138371_1052804	Ga0138371_10528041	F057762	VPQVGLPHIDPVTKAIILNIKPDGAKLFAIVKKYLFLKIKLPRDKIAITENIPTDVHADGT*
Ga0138371_1053363	Ga0138371_10533631	F078662	SKMASDISGFLRLQSDSWLTTLQQRVADAILSGSVSVSFSNASQSGTRELVMPTDELAAQLTPILIEKGIVTGTKPVRMTFARFSR*
Ga0138371_1055236	Ga0138371_10552361	F038718	NIFIWSSRKSVGHETNDRVMVHGDGTRAAGRRFKIYVRINKILGSQGGRGARSLRIKKSNVVDVQAGWLARPGTEAPETQFYFITHGSGAFLVLRLRTVVRGERASRSIVNRTTALWSIWIVASLILAYLALELFLI*
Ga0138371_1056162	Ga0138371_10561621	F092219	ITALAATFATVVIGSAASAATPTFNVYHDEVLPALVAANTPPTFNVVREEILPAMNKAVASMPVTFSDVYGDIVYHEEVVPMSAPATFAEVYGDIVYHEEVVPVADADPFSEHVVGGLGPQLPYDPMRGVDYGFVQALLQQNADPFAEQIVGGLGPQSDLDPMMTVMTDWVQPASNVDSVSEQIVGGLGPQPFNAITYSEVFVGGQLHIIPATDVETFSVAGN*
Ga0138371_1056481	Ga0138371_10564811	F080828	VSPHACAQRLGFPARMLASFLAAASSKLPFDALTDHISHDCWAPDYCEPKEFRYKLCKLRLRGRKPKGEAFQCGPGEFCEELDCLDKCWLPTECRCEAEGPLIGRMMCSEDCFQHPSTQWGLCVPLPDGQEEPEDEEPLKTHFHFHTQHELLHNAKLHIDEDSPMRREPTPKAHDEL*
Ga0138371_1060203	Ga0138371_10602031	F088982	ATNNGNVNVAPNGATLKANLSGTVVDDFGVALSGVNVYAYGKNTTTDAGGNWVMNDVPVTGVNINSTPQNLEQTTDVTTSGSIYITYTMAGYAEYKSKISNPAVITHYGTAGGNPNSIIVDNLVASEAVQLPELVNTITGLVVDKGSYYTAPVGEYDMASGLTVRLVPAVDVVNNAYGSAAQTGAGSTECYEGCGFYSVSELVTT
Ga0138371_1060370	Ga0138371_10603701	F064768	LGNQPEPTLVEEGMVIIDFEVRTKDEEIFRVGKDMIEQYVELNPELEGTQLYISDPMTVGLYPSHDENGNLYSGNDNPSPYNFDKLVQSLEEVGFYGKAAGYREVS*
Ga0138371_1061511	Ga0138371_10615111	F071278	MSLKKRLQFLLKNKKGNALLLATAGAIAATFSVYFFVSISTLSDDSKQRVTHLYNAYQMALSVKGKINGDSMQANKLDGTKVEDDIEDSLDPLFHNGSFITLKQMVVASIIIVQNDPTTTSERGEKIPYDVDNSGVLIKFANATDDVIAPSDTNRAIADRANLAKVHDLHLFVNLAGTTDIDSRPNGPYTAGDPFYYVVMASDAETGRTDGLTDDLKTVNLTQFPTGMLATNQGGPQA
Ga0138371_1066322	Ga0138371_10663221	F001479	MSKEMLFLCDVYDKYLDENDLPHRSADDILYGENACKLTGNQTYWLESFISTWDVIAEHC
Ga0138371_1066322	Ga0138371_10663223	F003869	MAKRQYKKTHFYSIGSMLTDEEVHQVWEIVGNALDRNGFTDADGELSIRVYDETLKKNVVNVIDKSLEVN*
Ga0138371_1070621	Ga0138371_10706211	F045808	GNGLYMMNGSYQAGAGREYCDWFYCGPHKRVQEFDPLKVFDDFYADGIRHMHDLVIETLRSLQIPHSVLDLKAWMMDRSKIK*
Ga0138371_1070780	Ga0138371_10707801	F041790	MRSGDDRFSSAYATAAPKTDATISARIMSEGSIRRDYGLLLRVTDDWDDSFRYQPRAGYRCTVNTGRDGKADSTLSVEVLREDGSRSTVASYAPAFALEPGTWYTVSASAVGNRITCQIMRGDWVLGSAEAVDDTYGDGYFATWNYKDDSGPHWWGDLRVVDAPPPAARRLRGSR*
Ga0138371_1070894	Ga0138371_10708942	F068935	FNAKTFLENYERVIKIFDEEFDYIKENLCGNLGWVDVWMPMYYFLSGKKYRHNNLLTETTSNPIWTISKEPIVHQYKVHYE*
Ga0138371_1074384	Ga0138371_10743841	F080161	LPSGASISAKSFLLEAFKPADIPAKRNPLGVTLLSSINDQLESNWLKLFGILIHTNYSLILKKLSN*
Ga0138371_1075852	Ga0138371_10758524	F067700	MTDTWGEWFKVPLVGAIGFTVTGSTIDEWLRICIAAATLVYTIAKAGSAIIEFKRKRNEKRN*
Ga0138371_1075852	Ga0138371_10758525	F082630	MKNAIEIGFLAAAIFVLSGCSALEKATGWAYEAEVSTQVLPDGTEQSVTNWVTKPNVKTGITIGGQLTPQPVGGIASQAILALLGIGAAIRGRQWKKAAVSGVEAAQELKQALNKSNAKGKLETILGNLKTQQKAAGTWSLIKSILAKI*
Ga0138371_1077406	Ga0138371_10774062	F005670	MQLLSRREYNLILRSLDKYELYMNSKEKELRETLEDKLYYNLYNPKDGVAQTNVDLSALYDIKTEKDLSY*
Ga0138371_1078219	Ga0138371_10782191	F000802	MTIDEYKDLLLEDEINIGYDVEEDLPDTLEDESWIDGLLTSGFHPIEDDELFGEPIVGYSLY*
Ga0138371_1084797	Ga0138371_10847971	F064350	SDLSAAKNAEIASATSAIESKTKRAGEVAVEIVQTQDDVEDTEADVAETEAFLADLGKQCAAKKAAWGERQAMRAQEVDAISQAIKILNDDDAFDLFKKTAPSFSQTGMGFLQKSSKSSNVLRAKGMLVSLAQVSRSHQTQLSLIASALKSKSVDFSKITEKIDGMVDVLTKEQGDDDSQKDFCDAEFEKSAAE
Ga0138371_1085595	Ga0138371_10855951	F082630	MKNAIEIGFLAGAIFALSGCSVLEKATGWAYEAEVSTQVLPDGTEQSITNWVTKPNVKTGITIGGQLTPQPVGGIASQAILALLGIGAAIRGRQWKKAAVSGVEAAQELKQALNKSNAKGKLESILGNLKTQQKAAGT
Ga0138371_1085595	Ga0138371_10855952	F067700	LGVKAMTDTWGEWLKVPLVGAIGFTVTGSTIDEWLRICIAAATLVYTIAKAGSAVIEFRRKRNEKRN*
Ga0138371_1087841	Ga0138371_10878411	F002490	MEMSEVKKEIKDYVRDHYKYYGWYPYDVQVGDVLYSYEQY
Ga0138371_1087841	Ga0138371_10878413	F014748	LNTFVPITGEIVDMYKNLVTIADDDAETVDQLLSFHATDLEVIS*
Ga0138371_1088396	Ga0138371_10883961	F000254	MGKGKGQSAPQFDLATALTKKETRVIRKAEYMIPYHMARCPNYGWKESPEYGRAEELKEKIAGIEEKAKKRWESNFV*
Ga0138371_1089016	Ga0138371_10890161	F063612	QKSVARGSPEDDVTLVTKEAGLKIPGRERISKEMSDSSVL*
Ga0138371_1089368	Ga0138371_10893681	F010769	SEPSMQCDSVFLGPDIGFVNVMVYNDADGSCEISMVELGAVCADFFEECMGFLASSEPAQQCEPVFLGPDMGYVNIMQYNDADNSCELSIGELMSVCSGEMFQTCLDFLASSEPQQQCEQVYLGPDMGFVNIMQYNDADGSCQINIAELQAVCSGAMFQTCLDFLESSEQGPQCESMFL
Ga0138371_1093487	Ga0138371_10934872	F073492	MSYRKQTEAAFKSYLAGKVGVPVYAGTSDTIKAMPCVVVAYLGGTQNPPHVGNLDATVSVSIQSEIDEEGQPNALEVHDELLSAIEDALFEPAIMDINSATDFHLFGVTEHSGIERDTEGTILRETITITAPCALGNF*
Ga0138371_1097812	Ga0138371_10978121	F075316	MGLNWIRERRRSGDKEVVQRKKVVNPDTGETPEGYNKMLRDCARIALAVASATLLLGWPQIALVASAIAAGLLQQGTTYSIKNWKWTAVSWCLLPACLTAWFLRSTAGMIDPDRGYSIYIIFVMVGRFTEFAAGSTVAIFLAFALAAPPDKSGEAR*
Ga0138371_1101884	Ga0138371_11018842	F005668	MFSLLFDLEDYAGTYRATRDAYLKAANELKLATGPYKAARDAYVAATATYTKS*
Ga0138371_1103659	Ga0138371_11036591	F023367	RKFVFTEKFISYADVEIYAENEEHARLQFQNGNYQYYDVSDFTDGHELIEVKEVELDD*
Ga0138371_1103659	Ga0138371_11036592	F009691	MTNPLNEKDYVTFARRFVKETVETMDIDEIRNIVIDYIHDEIQEKEDTFGQEGAFEEMQAWDQDIFDSVAKDYDLTLEDE*
Ga0138371_1108986	Ga0138371_11089861	F025972	MWKLLLLATASAVELKQKMIIRNTGSEDLAVYFMGALHDGDLSLWDGSETLNDIVSPGQVTARYVRYNDSFAVRSGDLKWRVRLSLYKNDDKEQPYKVTFHNVMTDEKDQPVELKHHAAGYLWIEPNHHVTHSAAQGHEFALRDRESKERLAVSVHALGRDEL*
Ga0138371_1110987	Ga0138371_11109871	F022419	MSLRYAALLAPACAFTHSQQPRRIIVRRDYSSIDDVFDSVFDDAFDAWSPFGLSRRRDPWSQFGLSRRRSPLAQQFGQLKRLSQAFEEQLQRVDEDDFLADTPLGQRRQLETKEDAPATKDGDAPKAEGDEAVAPAAPRGYAYSWSSSSVTQNGETRTTVRKNFKDADGAAKSFQERSLARDGKKLTETRTQGFGDAEAKLSFE
Ga0138371_1112017	Ga0138371_11120171	F070163	MLLRSADTGESTLWRGHLRQCLGDATQSYGSHTIAADPDALSRRWRALPWAKQRELFKSWAQPRASDCYPGDLRLSWWWDLRSVGFGHYASWSDDDISTVVTKTTYYQVWLSASGTRIYRKQSSWCDLPANIVIPVVLAAGAFVVAGLAVGAAKLLLWLW*
Ga0138371_1112771	Ga0138371_11127711	F077350	QKTEADPNQADIQALLEELEGKLRGALDVLSPSVKAMCDNLHKAASDIRTDKDATMLWGTLNDLQVFLSLVQQICTSVGTQGPQVVEFDNALGESLGTLETVVVDSEDPEEVALFIEESLIRAFDKWPEAEAELRKIAEV*
Ga0138371_1113493	Ga0138371_11134932	F022892	LVLFKSIRPPHKVAIQLNILIPVGTAIIMVAAVK*
Ga0138371_1123828	Ga0138371_11238281	F043449	GQGIHPIRGIKKAKLVNFHGLISGSKKLIFNESFIEPFNKSDKTANNVKKVSRVTKNFEILSRALYLPRIKIIPEIIRIPIDKSIVGKAEKKGILVNRTPETKLTAAIVKVPVIRLTTRNKGRYKEFLSLKPSNNDLPVDAVNLVPTNKNGYLKRLVIRIRPTNENPNLAPAVVDDNK*
Ga0138371_1126555	Ga0138371_11265551	F000023	ASGQQTDAQVLKKVSTRLQDFEAQITAQLSNMQSDFDKKLSHLNRGSSGMKGLDTTTAVAGIETVVEDLDALKYDVGELKDLLNNNKGEINHVRRIVLACERDMEDFTAAMDAVNVDLDEMRARVDATHSIITSRQRVEATMTAEISTMRLDIGDIQEALKNHDSWMEDVSNTLQQMQEKEENLTEDLINLKNEMNAKLDTKVDNVAWKEANDDLDAAIKTVRDMVSSLRLDVDARRRKVDEILATIRHDITAVETNLEESKAK
Ga0138371_1130648	Ga0138371_11306481	F060931	LVLGARKGTADYVAAVFRWSKGAVQLSWTSFWFPLHKYCYPWLVLFFVVAPIMATVIYFQATRLDHCHRTKYSSKMWATLGVDKDDQWCRLGPTVGLISDPIFVCYGIYMVLMSVASFNNPRIGANLIMFENITYFFSSQTAYFWLAIPCVMTMAPDPSALTYDAVTLTIGGLWVEVHMNYIYGHIAAWAPLENNQAPDKLGLLRAQQMFFVTAPLHTLAIFQGTQDSWKILFAAKD
Ga0138371_1131675	Ga0138371_11316751	F051931	EGPQIKKRQRKRWVDGHFELQGWKYALHVLFVLMMTIMGTSAWVTFLPGTGVNKDPLPPTMREVEDHMELNAETQNPLCLVAFSISASEPRMMVLRNLVGKMMAWVVRRKFVFESQAMTQKVQLFEEESSLKHLHSPTRVRISEDTNMAYTERLKAFYAKYDPMKVDGVAVLLKKYKGKEEELMTELVHKYGPEP
Ga0138371_1132276	Ga0138371_11322761	F028816	MNLKETCQMTDQEFEERTKTRAEETKAVSEALAILSSDDAHDTFTSTFNFIQVSKATQSKRDHAEKILYAVAKKVRHPLLATLATRVRLDNFKKVTEEIDGMIADLKKEKADDVKMKDFCIEALHKNEVETEMKKRDIEALEAKIVELAGHIDELTKAIATLNAEVEETHMMVK
Ga0138371_1132581	Ga0138371_11325811	F005911	GETMCLKDRLLQMLKSKKGNALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSLKAKIDGADINQARLGSKTEPEIEAPIDEEFHNGNFIKLKTMVKKAIIIVTDDPTATARKGVDTAYDLDNSGVRIKYAEADGTVITPGSSDTKIVADVHLFVNLAGTADADSNSPYDTGEPFYYILMDKSADANLGASIDETVSATFTAGILDTTDGGPQAEVSVVLPQDTEE*
Ga0138371_1133158	Ga0138371_11331581	F056635	MKFALLALTIAVASADKCSHTTCKMVDVDSLFPGHLGSGYKVMQITHSNEETVCHKHSDAHTNHGDAAFAWTETTNKLHCKIIDSDPIKKNEQCECHRLGTNGPKPSTWQQGVNHDLTVSETTGTDKKTYTKGQKTNDLDTIEEPDRIANRNSLLP*
Ga0138371_1133272	Ga0138371_11332721	F047718	MSTTKAFRGFIPARKKGGGYNNEAVTDTITLTSTGQAQSPTNK
Ga0138371_1134161	Ga0138371_11341611	F000351	MKCVLFFALAAAVVQEVTPVQKVIQLLQGMAEKGKKEKHEEQVQFAAYKQFCDDTTVEKQRAIKEATAKMEQLVAAIQKAEADAATLAKEIAQLDEDISVYEGDKKAATEVREMENADYLTTHKDYSESVDALERAIATLKKQAYDRTQLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300011306: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S23 DCM_B metaT (Metagenome Metatranscriptome) (version 2)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences