NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300009921

3300009921: Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S8



Overview

Basic Information
IMG/M Taxon OID3300009921 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0120440 | Gp0149085 | Ga0131762
Sample NameMicrobial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S8
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of New South Wales
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size54217759
Sequencing Scaffolds25
Novel Protein Genes31
Associated Families14

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available25

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSponge Microbes In A High Co2 World
TypeHost-Associated
TaxonomyHost-Associated → Porifera → Sponge → Unclassified → Unclassified → Marine → Sponge Microbes In A High Co2 World

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Host-associated → Animal → Animal corpus

Location Information
LocationDavies Reef, Great Barrier Reef, Australia
CoordinatesLat. (o)-18.833Long. (o)147.683Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F007683Metagenome / Metatranscriptome346Y
F010384Metagenome / Metatranscriptome304Y
F013612Metagenome / Metatranscriptome269Y
F015565Metagenome / Metatranscriptome253Y
F017963Metagenome / Metatranscriptome237Y
F020857Metagenome / Metatranscriptome221Y
F022150Metagenome / Metatranscriptome215Y
F024258Metagenome / Metatranscriptome206Y
F035204Metagenome / Metatranscriptome172Y
F041611Metagenome / Metatranscriptome159Y
F049434Metagenome / Metatranscriptome146Y
F073151Metagenome / Metatranscriptome120Y
F076933Metagenome / Metatranscriptome117Y
F085218Metagenome111Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0131762_104088Not Available1387Open in IMG/M
Ga0131762_105688Not Available1165Open in IMG/M
Ga0131762_108713Not Available957Open in IMG/M
Ga0131762_109928Not Available905Open in IMG/M
Ga0131762_110693Not Available879Open in IMG/M
Ga0131762_110699Not Available878Open in IMG/M
Ga0131762_114500Not Available768Open in IMG/M
Ga0131762_118150Not Available691Open in IMG/M
Ga0131762_118950Not Available677Open in IMG/M
Ga0131762_119547Not Available668Open in IMG/M
Ga0131762_120780Not Available649Open in IMG/M
Ga0131762_121486Not Available639Open in IMG/M
Ga0131762_121891Not Available633Open in IMG/M
Ga0131762_122888Not Available619Open in IMG/M
Ga0131762_123300Not Available613Open in IMG/M
Ga0131762_123477Not Available611Open in IMG/M
Ga0131762_124192Not Available602Open in IMG/M
Ga0131762_126826Not Available570Open in IMG/M
Ga0131762_128296Not Available554Open in IMG/M
Ga0131762_128680Not Available550Open in IMG/M
Ga0131762_130609Not Available531Open in IMG/M
Ga0131762_130737Not Available529Open in IMG/M
Ga0131762_132122Not Available517Open in IMG/M
Ga0131762_132797Not Available512Open in IMG/M
Ga0131762_133121Not Available509Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0131762_104088Ga0131762_1040881F017963VHPQGANSMAASGLTLRSDLVGTGRAISVLFGINGVRNKQSHLVGPPFPEFKARFSAMAGWHFSRDLTRRLLIGGCGHSHVSVKYG*
Ga0131762_105688Ga0131762_1056882F015565MLLFCAKTIVKDSRIFELARLKKKKEKHFGRLATLWFGTFATHFSATGCVFHRENTRR*
Ga0131762_106944Ga0131762_1069441F049434MKTLEDEWYVVIKAYKLAVFEILGDFFVLPYIACPRYPYIRVYRLYDASHDYDLQLR*
Ga0131762_108713Ga0131762_1087131F013612MSLLAMSLGLRFCVRRKGRTGGSGWVRPKGANSMAASGLVLRSDLVGTGRAISVLFGINGVRNKRSHLAGPPFPELKARFSATAGWHFSRDLTRCLLIGGCGRSHESVKYG*
Ga0131762_109928Ga0131762_1099281F041611MLELKFAIYCRAATPLSQASYRYAVLAEESQAFFKHNNSISNSAILRNYISLLSDLCAYVQVKKKKWRRKGSHSSSVGGSNRLASLQTWKKAMGWRTAQ*
Ga0131762_110693Ga0131762_1106932F073151AQNAKFWHFSSYHHFKAVRASDFILGLGAHQAFCFTNPTFEAVDSLLSEVVAIKPKV*
Ga0131762_110699Ga0131762_1106991F022150AISVLFGINGVRNKRSHLVGPPFPEFKARFSAMAGWHFSSDLARRSLIGGCGHCHVSVKYG*
Ga0131762_114500Ga0131762_1145002F010384IWKRFIRSLLGVDRCSLSWGSGRCLLEVYQGWTDAASAGDLEEVY*
Ga0131762_118150Ga0131762_1181501F010384MQPQLGIWKRFIRSLLGVDRFSLSWASGRGLLEVYWGWTDAASAGDQEEVY*
Ga0131762_118950Ga0131762_1189502F022150RNKRSHLVGPPFPEFKAHFSATAGWHFSRDLTRSLVIGGCGHSHVSVKYG*
Ga0131762_119547Ga0131762_1195472F007683MSLPAMTSRDRFCVSRKGGTGEGGWVHPKGANSMAASGLVFRSDLVGTGRAISILFGING
Ga0131762_120780Ga0131762_1207801F017963RSDLVGTGRAISILFGINGVRNKRSHLVGPPFLEFKACFSATAGWHFSRDLARHLLIGGCGQSHVSAKHG*
Ga0131762_121486Ga0131762_1214861F020857VLFLQDYCALQVLLIKMNFTTAVAPPFVHPMMSPPATLTRKYGFFSEPTWQRQVAKYSNLKHCESLSFSGDIESLEPSK
Ga0131762_121891Ga0131762_1218912F022150AISILFGINGVRNKRSHLVGPPFPEFKARFSATAGWHFSRDLTTHLLIGGCGQSHVSAKHG*
Ga0131762_122888Ga0131762_1228881F010384PQLGIWKRFIRSLLGVDRCSLSWGSGRGLLEVYEGCTEAASAGDQEEVY*
Ga0131762_123300Ga0131762_1233001F085218AASLSSQASSVDAVLAKELLTRPGSLQTLPAHQLYF*
Ga0131762_123300Ga0131762_1233002F015565VLVHCSGENAAVCAKAIVKESRNFELAHLKKKKKKEKHFGRLVTFWFGTFAMLFSAIGCVVCHENTQR*
Ga0131762_123477Ga0131762_1234771F035204CEPVFQVIESGRDGENLEKLSMETTVLNVHYVIHIIGFHVTLMRPD*
Ga0131762_124192Ga0131762_1241921F010384MAPWKVHQSGQIQPELGIRKRFIRSLLGVDRCSLSWGSGRGLLEGYWGWTDAASAGDLEEVY*
Ga0131762_125393Ga0131762_1253932F076933MIYANCGAIAVITSTTYMTIVELFDEYSAPFSPEVISSLIMTPTSILSNIILSMETGRSAKACC*
Ga0131762_126826Ga0131762_1268262F073151FWHFSSYHHFKAVRASDFILGSLEYQACFTNPTFEAVDSLLSEVVAVRTKV*
Ga0131762_127358Ga0131762_1273582F041611YYRAVSLPSQASYAVLAEESQAFFKHSLHTKSISNSAILRNDYISLLSDLCACVHIKKMASQGSHSSSERFESPCVTSNLEKAMGWCTAQ*
Ga0131762_127572Ga0131762_1275721F076933MYPQNITVRSFLFMIYANCGAIAVIRSTTYMTIVELFDEYSAPYSPEVIRSLIMTPTSILNDIILSMETERSAKACC*
Ga0131762_127739Ga0131762_1277391F076933MIYANCGAIAVITSTTYMTIVELFDEFSAPFSPEVIRSLIVTPTSILNDIILSMETERSAKACC*
Ga0131762_128296Ga0131762_1282961F010384IQPQLGIRKRFIRSLLRVDRCSLSWASGRGLLEIYQGWTDAASAGDLEEVN*
Ga0131762_128680Ga0131762_1286801F010384FIEGGQMQPQLGIWKRFIRSLLGVDRFSLSWGSGRGLLEVYWGWTDSASAGDQEEVC*
Ga0131762_130609Ga0131762_1306091F010384MQPQLGIWKRFIRSLLGVDRCSLSWGSGRGLLVVYRGWTDAASAGDQEEVY*
Ga0131762_130737Ga0131762_1307371F024258MLGLGSVAALAIICVAENGVVLELRRTAASQNCHSCQFADKRDERGYYDESDVVLCVN*
Ga0131762_132122Ga0131762_1321221F022150GSHLVGPPFPEFKAHFSAMTVWHFSRDLTRRLLIGGCSQGHGSAKHG*
Ga0131762_132797Ga0131762_1327971F010384RGGQMQPQLGIWKWFIRSLLRVDRCSLSWASGRGLLEVYRGWTDAASAGHLEEVY*
Ga0131762_133121Ga0131762_1331211F024258MRLHVNYACAIGARLNLDLLCVAQNGVVLEHCRITASQNCHSCQFANKRAERGYYDESDIVLCVK*

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