NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Sample 3300009905

3300009905: Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S9



Overview

Basic Information
IMG/M Taxon OID3300009905 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0120440 | Gp0149086 | Ga0131763
Sample NameMicrobial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S9
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of New South Wales
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size41626688
Sequencing Scaffolds26
Novel Protein Genes27
Associated Families14

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available22
All Organisms → cellular organisms → Eukaryota → Opisthokonta2
All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina1
All Organisms → cellular organisms → Eukaryota1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSponge Microbes In A High Co2 World
TypeHost-Associated
TaxonomyHost-Associated → Porifera → Sponge → Unclassified → Unclassified → Marine → Sponge Microbes In A High Co2 World

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Host-associated → Animal → Animal corpus

Location Information
LocationDavies Reef, Great Barrier Reef, Australia
CoordinatesLat. (o)-18.833Long. (o)147.683Alt. (m)N/ADepth (m)N/A
Location on Map
Zoom:    Powered by OpenStreetMap ©


Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F007683Metagenome / Metatranscriptome346Y
F010384Metagenome / Metatranscriptome304Y
F017963Metagenome / Metatranscriptome237Y
F020857Metagenome / Metatranscriptome221Y
F022150Metagenome / Metatranscriptome215Y
F023046Metagenome / Metatranscriptome211Y
F041611Metagenome / Metatranscriptome159Y
F043240Metagenome / Metatranscriptome156Y
F063409Metagenome / Metatranscriptome129Y
F069743Metagenome / Metatranscriptome123Y
F073151Metagenome / Metatranscriptome120Y
F076933Metagenome / Metatranscriptome117Y
F083784Metagenome112Y
F085218Metagenome111Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0131763_101496Not Available2548Open in IMG/M
Ga0131763_103287All Organisms → cellular organisms → Eukaryota → Opisthokonta1271Open in IMG/M
Ga0131763_103819Not Available1135Open in IMG/M
Ga0131763_104171Not Available1071Open in IMG/M
Ga0131763_104463Not Available1027Open in IMG/M
Ga0131763_105539All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina902Open in IMG/M
Ga0131763_108253Not Available748Open in IMG/M
Ga0131763_108463Not Available740Open in IMG/M
Ga0131763_109309Not Available710Open in IMG/M
Ga0131763_110276Not Available682Open in IMG/M
Ga0131763_110417Not Available678Open in IMG/M
Ga0131763_110648Not Available671Open in IMG/M
Ga0131763_111627Not Available646Open in IMG/M
Ga0131763_112496Not Available627Open in IMG/M
Ga0131763_113386All Organisms → cellular organisms → Eukaryota → Opisthokonta608Open in IMG/M
Ga0131763_114007Not Available597Open in IMG/M
Ga0131763_114631Not Available585Open in IMG/M
Ga0131763_114988Not Available579Open in IMG/M
Ga0131763_115103Not Available577Open in IMG/M
Ga0131763_115320All Organisms → cellular organisms → Eukaryota573Open in IMG/M
Ga0131763_115504Not Available570Open in IMG/M
Ga0131763_115992Not Available562Open in IMG/M
Ga0131763_117140Not Available544Open in IMG/M
Ga0131763_117204Not Available543Open in IMG/M
Ga0131763_118484Not Available526Open in IMG/M
Ga0131763_120313Not Available507Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0131763_101496Ga0131763_1014964F017963LRSDLVGTGRAISVLFGINGVRNKQSHLVGPPFPEFKARFSAMAGWHFSRDLTRRLLIGGCGHSHVSVKYG*
Ga0131763_103287Ga0131763_1032873F010384MQPQLGIWKRFIRSLLKVDRCSLSWASGRGLLEVYWGWTDAASAGHLEE
Ga0131763_103401Ga0131763_1034011F076933MIYVNCGAIAVITSATYMTIVEFFDEYFAPFSPEVVRSLIMTPTSILKLSMETERSAKACCSGE*
Ga0131763_103819Ga0131763_1038192F010384MQPQLGIRKRFIRNLLRVDRCSLSWASGRGLFEVYWGWTDAASAGHLEEVY*
Ga0131763_104171Ga0131763_1041711F022150RSHLLGPPFPEFKAHFSATAGWHFSRDLTRHLVIGGCGHSHVSVKYG*
Ga0131763_104463Ga0131763_1044631F069743MQSHTIHLSIAPGDYGALTGFSLGPFNNDVRQLSFNVSIVNDMIPEGTETFIANLTLLPADQARLRNRVTVQPDSATVTILDVQGKILAV*
Ga0131763_105539Ga0131763_1055391F010384GIWKRFIRSLLWLDRCSLSWASGRGLLEVNMGWTDAASAGDQEEVY*
Ga0131763_108253Ga0131763_1082531F041611MLELKFAIYCRAATPLSQASYMYAVLAEESQAFFKHNNSISNSAILRNYISLLSDLCAYVQVKKKKWRRKGSHSSSVGGSNRLA*
Ga0131763_108463Ga0131763_1084631F043240ATWSIEAQEKPWNKTGGMTPWMASTASAGALKSGESETTPPIIAPLRNVTCPPP*
Ga0131763_109309Ga0131763_1093091F010384MQPQLGIWKGFIRSLLRVDRCSLSWASGRGLLEVYWGWTDAASAGHLEEVY*
Ga0131763_110276Ga0131763_1102761F010384PQLGIWKRFIRSLLGVERFSLSWGSGRGLLEVYEGWTEAASAGDLAEVYKKFIGHPYTV*
Ga0131763_110417Ga0131763_1104171F085218MLELKFAIYYRAASLPSQASYAVLAEESLTRPGFLQTLPAHQQYF*
Ga0131763_110648Ga0131763_1106481F007683MSLPAMTSRDRFCVSRKGGTGEGGWVHPKGANSMAASGLVLRSDLVGTGRAISV
Ga0131763_111627Ga0131763_1116271F010384IRKRFIRSLSGVNRCSLSLLSRRGLLEVYEGWIESASAGDLEEVY*
Ga0131763_112496Ga0131763_1124962F010384MQPQLGIRKRFIRSLLRVDRCSLSWESGRDLLEVYWGWTDAASAGHLEEVD*
Ga0131763_113386Ga0131763_1133861F010384MQPQLGFWKRFIRSLLGVDRFSLSWGSGRGLLEDYWGWTDAASAGHLEEVD*
Ga0131763_114007Ga0131763_1140071F073151MLQYVSGFEKRSNFTQNNKFWHFSSYHHFKAVRASDFILGLGAHQAFRFTNPTFEAVDSLLSEVVAIKPKV*
Ga0131763_114631Ga0131763_1146311F010384VLNRKRFIRSVLRVDRCILSWAYGRGLLEVCWGWTDAASAGHVEDVY*
Ga0131763_114988Ga0131763_1149882F022150INGVRNQQSHLVGPPFPEFKARFSAMAGWHFSGDLTRHLLIGGCGQSHVSAKHG*
Ga0131763_115103Ga0131763_1151031F010384KRFIRSLLGVDRCSLSWGSGRGLLEVYWGWTDVASAGDQEEVY*
Ga0131763_115320Ga0131763_1153201F010384QLGIWKRFIRSLLGVDRCSLSWGSGRGLLEVYQWWTDAASAGDLEEVY*
Ga0131763_115504Ga0131763_1155042F020857VLFLQGYCALQELLMKMKFTLAVAPPFVYPMTSLLATPTRSVRKYGFFSEPARRRQVARYGNLKRCESQPFSGDIESLEPSKF*
Ga0131763_115992Ga0131763_1159922F010384MRPQLGIWKRFIRRLLGVDRCGLSWGSGRGLLEVYWGWTDAASAGDQEEVY*
Ga0131763_117140Ga0131763_1171402F063409CSLAKFIFNETAAVQGTIIQPCSVITDGMQAIMQLLQGVVTYTSPVEAFATRVGRIMLA*
Ga0131763_117204Ga0131763_1172042F083784NNTQPFEVTMAAGYSVVSADIPIFDDEINEAAEDFVVVLEVVNSTNPVEFTTQTTVCRIPQSDRKCHLAKV*
Ga0131763_118484Ga0131763_1184841F023046NKRSHLVGPPFPEFKARFSATAGWHFSSDLARHLLIGGCGHSTYLLSMAEITSGSSFEHHNPTGQKLGYV*
Ga0131763_120313Ga0131763_1203131F007683MSLPAMSLGLRFCMSRKGGTRGGRWMHPKGAISMATSGLVFRSNLVGTGRAIFILFGISGVKNKRSHLVGPPFPEFKARFSATAGWHF

 ⦗Top⦘



© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.