NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300009203

3300009203: Microbial communities of wastewater sludge from Singapore - Sludge9_b2_February



Overview

Basic Information
IMG/M Taxon OID3300009203 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0117969 | Gp0126338 | Ga0103749
Sample NameMicrobial communities of wastewater sludge from Singapore - Sludge9_b2_February
Sequencing StatusPermanent Draft
Sequencing CenterSingapore Centre on Environmental Life Sciences Engineering (SCELSE)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size298663318
Sequencing Scaffolds24
Novel Protein Genes25
Associated Families22

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → Viruses1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea5
All Organisms → cellular organisms → Eukaryota → Opisthokonta1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Thermoguttaceae → Thermogutta → Thermogutta terrifontis1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2
Not Available6
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes1
All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta2
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Theileriidae → Theileria → Theileria annulata1
All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameMicrobial Communities Of Wastewater Sludge From Singapore
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wastewater Sludge → Microbial Communities Of Wastewater Sludge From Singapore

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationSingapore
CoordinatesLat. (o)1.2Long. (o)103.45Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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