NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300008652

3300008652: Microbial communities of saline water collected from the North Sea in Germany - HE327_15



Overview

Basic Information
IMG/M Taxon OID3300008652 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0117953 | Gp0126213 | Ga0103624
Sample NameMicrobial communities of saline water collected from the North Sea in Germany - HE327_15
Sequencing StatusPermanent Draft
Sequencing CenterGoettingen Genomics Laboratory
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size4177836
Sequencing Scaffolds3
Novel Protein Genes3
Associated Families3

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → Viruses → Predicted Viral1
Not Available1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Acartiidae → Acartia → Acartia pacifica1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameMicrobial Communities Of Saline Water Collected From The North Sea In Germany
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → North Sea → Microbial Communities Of Saline Water Collected From The North Sea In Germany

Alternative Ecosystem Assignments
Environment Ontology (ENVO)marine biomemarine water bodysea water
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Water (saline)

Location Information
LocationNorth Sea, Germany
CoordinatesLat. (o)54.449Long. (o)8.22Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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