NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300008070

3300008070: Wastewater microbial communities from the hospital sewers in Singapore - Hospital 2



Overview

Basic Information
IMG/M Taxon OID3300008070 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0118183 | Gp0131406 | Ga0110938
Sample NameWastewater microbial communities from the hospital sewers in Singapore - Hospital 2
Sequencing StatusPermanent Draft
Sequencing CenterSingapore Centre on Environmental Life Sciences Engineering (SCELSE)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size183130469
Sequencing Scaffolds6
Novel Protein Genes9
Associated Families9

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria1
All Organisms → cellular organisms → Bacteria1
All Organisms → Viruses → Predicted Viral1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameWastewater Microbial Communities From The Hospital Sewers
TypeEngineered
TaxonomyEngineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From The Hospital Sewers

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationSingapore
CoordinatesLat. (o)1.3Long. (o)103.8Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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