Basic Information | |
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IMG/M Taxon OID | 3300007615 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0114292 | Gp0125881 | Ga0102773 |
Sample Name | Marine microbial communities from the Southern Atlantic ocean - KN S14 DCM2_A metaT (Metagenome Metatranscriptome) |
Sequencing Status | Permanent Draft |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 147792302 |
Sequencing Scaffolds | 44 |
Novel Protein Genes | 48 |
Associated Families | 37 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata | 10 |
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | 2 |
Not Available | 21 |
All Organisms → cellular organisms → Bacteria → Proteobacteria | 1 |
All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium MedDCM-OCT-S08-C235 | 1 |
All Organisms → cellular organisms → Eukaryota | 1 |
All Organisms → cellular organisms → Bacteria | 1 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203 | 1 |
All Organisms → Viruses → Predicted Viral | 3 |
All Organisms → cellular organisms → Archaea | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling |
Type | Environmental |
Taxonomy | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | marine biome → marine water body → sea water |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) |
Location Information | ||||||||
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Location | Southern Atlantic Ocean | |||||||
Coordinates | Lat. (o) | -28.2362 | Long. (o) | -38.4949 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map | ||||||||
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