3300007115: Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble', st44is

Overview

Basic Information

• IMG/M Taxon OID: 3300007115
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117787 | Gp0124745 | Ga0101551
• Sample Name: Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble', st44is
• Sequencing Status: Finished
• Sequencing Center: University of New South Wales
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 182683688
• Sequencing Scaffolds: 11
• Novel Protein Genes: 11
• Associated Families: 11

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	8
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Marine Sponge (Stylissa Sp.) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Upa-Upasina (low pH), Papua New Guinea
• Coordinates
  • Lat. (^o): -9.8241
  • Long. (^o): 150.825833
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F004325	Metagenome / Metatranscriptome	443	Y
F016820	Metagenome	244	Y
F020710	Metagenome / Metatranscriptome	222	Y
F023877	Metagenome / Metatranscriptome	208	Y
F043451	Metagenome	156	N
F051267	Metagenome	144	N
F053343	Metagenome / Metatranscriptome	141	Y
F064809	Metagenome	128	N
F077401	Metagenome	117	N
F085224	Metagenome	111	N
F087060	Metagenome	110	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0101551_1015617	Not Available	1300
Ga0101551_1027109	Not Available	1049
Ga0101551_1034348	Not Available	957
Ga0101551_1041471	All Organisms → cellular organisms → Bacteria	886
Ga0101551_1046008	Not Available	848
Ga0101551_1074360	Not Available	685
Ga0101551_1092027	Not Available	618
Ga0101551_1104859	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	577
Ga0101551_1106489	Not Available	573
Ga0101551_1114279	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.	551
Ga0101551_1128691	Not Available	514

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0101551_1015617	Ga0101551_10156173	F023877	VDDHYKNFGFYPYEVEVDGQVYSYGTYWEILEDGRFD*
Ga0101551_1027109	Ga0101551_10271093	F043451	MITGKCILVETMSNIHEWIYPPQPSVDRIMYIPTRSVHILEYQEEMIDAEGNVYWKTVDTTTIGASTSVKEFLEQMKDYYETKSCRNNRIQS*
Ga0101551_1034348	Ga0101551_10343482	F087060	MYTIITTKPMTQSHTTSNDTSAKQVVRTLSGITQGKPVVTGDAPQTKKFDPVADQDNRLMQMLELSLAIKDKKSEYDDLRKSFTNDLKAALDDNEENPKIRHSENERVHVYLSKRRVYKYSDKLTAKRLKLEAQMADLKDEEAKEVRHNKAELTKETFTVSFKG*
Ga0101551_1041471	Ga0101551_10414712	F020710	VTATIARADAADSMMFKVTSDTTFKIFNMDAITDTTANGDGVFISDTASDEGKAAYIVSRVNYLRPAKAVGWNDIQGFIDFASQIGGGDA*
Ga0101551_1046008	Ga0101551_10460081	F077401	MTMKTFWAWKHDINSTHKNMSGYTKILARDMNSAYRKAHKHYKHHMFNSDFNVSVMSGETDKHGYAKEVQYSTGKWTRKAWSTYKYFHSLEPEMQERVHNHYKEFGDDWKGQDKTDLRFLVALLRQEPAND*
Ga0101551_1074360	Ga0101551_10743602	F064809	MLTTTFTGNITFAEIVSQDGQGNNLDNPFLAIKVAVNDVNDNGLTIAVRTKNGLLEAAQNGEDLVGTRVVIAGSIELPSIRSHWVDNDGNLVALKKPQCRVYANTIERLNRKPAPDTVQKELAIK*
Ga0101551_1092027	Ga0101551_10920271	F016820	LMTKKEFSYIVFSSCGDNVQEIHGVYKDLEGAAYGAKAALSTLFPNHGDKAEIIRCEIISTEEARVTYEKTKPKDIFEKCEDGFCPMPTPQTQEVS*
Ga0101551_1104859	Ga0101551_11048591	F004325	PIGSPQLIGIGGTDVQSQLAAGNRDEYANIRMKQGDTRVVEGAKMPSDLDASYLKLNLPGSPLPANGLLVPQNLRAAERNQDMIGVSEQMFLAKYLPAAGLTQLPVGQPPLESKKGKK*
Ga0101551_1106489	Ga0101551_11064891	F051267	AICWINYTNAQAIFTYANHEQEMAETEFRLDDSADESEVISKLIKSYFDMDNAEDREMISDIVKVSFCFSDTEYPQKLKKKEAEKFWALPTMKAFLERNGKYYFDEEQRDDVETSIKELLDCWKEEIV*
Ga0101551_1114279	Ga0101551_11142791	F053343	LSLGGYNEYIKRNLSLHSNHHSIMNPQAHRSTEELKTIVKALSKLSLLNTPEEDQRLFECEQELRKRKKEQDFIDAHFQVITF*
Ga0101551_1128691	Ga0101551_11286911	F085224	MFPYSVFSGMMLELLEMGAPMFYPSKSLLKRWDEQYGIMTQRTSAEGKRNAGGFSNVAYGKDSAPDPNDSVNQDALHYWLEKSEWYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRDERWAEIRRDLTKTNSSGV*