Sample 3300007050

Basic Information
IMG/M Taxon OID	3300007050 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117787 \| Gp0124826 \| Ga0101562
Sample Name	Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', st7u
Sequencing Status	Permanent Draft
Sequencing Center	University of New South Wales
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300007050 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0117787 | Gp0124826 | Ga0101562

Sample Name

Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', st7u

Sequencing Status

Permanent Draft

Sequencing Center

University of New South Wales

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	62437910
Sequencing Scaffolds	38
Novel Protein Genes	43
Associated Families	21

Dataset Contents

Total Genome Size

62437910

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	37
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

Not Available

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica

Ecosystem Assignment (GOLD)
Name	Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
Type	Host-Associated
Taxonomy	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Stylissa Sp. (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Ecosystem Assignment (GOLD)

Name

Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Type

Host-Associated

Taxonomy

Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Stylissa Sp. (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

Unclassified

Earth Microbiome Project Ontology (EMPO)

Free-living → Saline → Water (saline)

Location Information
Location	Upa-Upasina 'control' site, Papua New Guinea
Coordinates	Lat. (^o)	-9.752083	Long. (^o)	150.854133	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

Upa-Upasina 'control' site, Papua New Guinea

Coordinates

Lat. (^o)

-9.752083

Long. (^o)

150.854133

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F007683	Metagenome / Metatranscriptome	346	Y
F010384	Metagenome / Metatranscriptome	304	Y
F013612	Metagenome / Metatranscriptome	269	Y
F015565	Metagenome / Metatranscriptome	253	Y
F017963	Metagenome / Metatranscriptome	237	Y
F020857	Metagenome / Metatranscriptome	221	Y
F022150	Metagenome / Metatranscriptome	215	Y
F023046	Metagenome / Metatranscriptome	211	Y
F024258	Metagenome / Metatranscriptome	206	Y
F035204	Metagenome / Metatranscriptome	172	Y
F038110	Metagenome / Metatranscriptome	166	Y
F041611	Metagenome / Metatranscriptome	159	Y
F049434	Metagenome / Metatranscriptome	146	Y
F059684	Metagenome / Metatranscriptome	133	Y
F063409	Metagenome / Metatranscriptome	129	Y
F068499	Metagenome / Metatranscriptome	124	Y
F069743	Metagenome / Metatranscriptome	123	Y
F073151	Metagenome / Metatranscriptome	120	Y
F074458	Metagenome / Metatranscriptome	119	Y
F076933	Metagenome / Metatranscriptome	117	Y
F100481	Metagenome	102	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0101562_1006427	Not Available	1110	Open in IMG/M
Ga0101562_1006509	Not Available	1103	Open in IMG/M
Ga0101562_1006584	Not Available	1097	Open in IMG/M
Ga0101562_1007654	Not Available	1027	Open in IMG/M
Ga0101562_1007717	Not Available	1024	Open in IMG/M
Ga0101562_1009431	Not Available	941	Open in IMG/M
Ga0101562_1011810	Not Available	861	Open in IMG/M
Ga0101562_1012166	Not Available	850	Open in IMG/M
Ga0101562_1013787	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	805	Open in IMG/M
Ga0101562_1017578	Not Available	728	Open in IMG/M
Ga0101562_1017923	Not Available	722	Open in IMG/M
Ga0101562_1018385	Not Available	713	Open in IMG/M
Ga0101562_1020411	Not Available	681	Open in IMG/M
Ga0101562_1021908	Not Available	660	Open in IMG/M
Ga0101562_1022599	Not Available	650	Open in IMG/M
Ga0101562_1023213	Not Available	642	Open in IMG/M
Ga0101562_1023253	Not Available	642	Open in IMG/M
Ga0101562_1024559	Not Available	626	Open in IMG/M
Ga0101562_1026783	Not Available	601	Open in IMG/M
Ga0101562_1027354	Not Available	595	Open in IMG/M
Ga0101562_1028053	Not Available	588	Open in IMG/M
Ga0101562_1028598	Not Available	582	Open in IMG/M
Ga0101562_1028648	Not Available	582	Open in IMG/M
Ga0101562_1028844	Not Available	580	Open in IMG/M
Ga0101562_1029003	Not Available	578	Open in IMG/M
Ga0101562_1029193	Not Available	576	Open in IMG/M
Ga0101562_1030639	Not Available	563	Open in IMG/M
Ga0101562_1030774	Not Available	562	Open in IMG/M
Ga0101562_1032740	Not Available	545	Open in IMG/M
Ga0101562_1032917	Not Available	543	Open in IMG/M
Ga0101562_1033587	Not Available	538	Open in IMG/M
Ga0101562_1034152	Not Available	534	Open in IMG/M
Ga0101562_1034308	Not Available	533	Open in IMG/M
Ga0101562_1036749	Not Available	514	Open in IMG/M
Ga0101562_1037425	Not Available	510	Open in IMG/M
Ga0101562_1037436	Not Available	510	Open in IMG/M
Ga0101562_1038159	Not Available	505	Open in IMG/M
Ga0101562_1038532	Not Available	503	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0101562_1001984	Ga0101562_10019842	F049434	MKALEDKRYVVIKAYKFTVFEIWRDFNVLSYIACPRYPYIRVYRLYDNMAFQIDMA*
Ga0101562_1006427	Ga0101562_10064273	F022150	SHLVGPPFPELKARFSAMVGWHFSRDLTRRLLIGGCG*
Ga0101562_1006509	Ga0101562_10065091	F059684	LTGSHLEVAVEGRKLAYTVHFTFYKAVARKNRQSRDRK*
Ga0101562_1006584	Ga0101562_10065842	F069743	MYMQSHTIHLSIAPGDYGALTDFPLGPFSNSVRQLSFNVSIVNDVIPEDDETFIANLTLSPADQVRLGNRVTVQPDSATVTIQDDEGTTVIDN*
Ga0101562_1007366	Ga0101562_10073662	F100481	VTMPLSSIKDLAVAISTRAGPAEDDPPLYKLGSKPIQAVCKGENGLGS*
Ga0101562_1007654	Ga0101562_10076541	F063409	ARSQGGFEGVRTNPPCSLAKFIFNETAAVQGTIIQPCSGIVTDGMQATMQLLQGVVTYTSAVEAFATGIKNFDR*
Ga0101562_1007717	Ga0101562_10077172	F035204	MPPCKPVFQVIESGRDGENLGKLSMETTVLNVHYVIHIIGFHDFNET*
Ga0101562_1008233	Ga0101562_10082332	F076933	MIYANCGAIVVITSTTYMTIVELFDEYSAPFSPEVIRSSIMTLTSILNDIISSMETGRSTKACC*
Ga0101562_1009431	Ga0101562_10094311	F038110	MVEVCSPAGAEVRGHMLKGDGPESLAISICDVSYKLMNLKIILLLIHCPVDMPTTQAWLSYLVMAERYRTVHVMVSEDR*
Ga0101562_1011810	Ga0101562_10118102	F007683	MSLPAMSLGLRFCMSRKGGTGGGRWVRPKGANSMAASGLVFRSNLVGTGRAISILFGINGVRNQRSHLVGPPFQEFKAHFSAMAGGISRKT*
Ga0101562_1012166	Ga0101562_10121662	F023046	KARFSATAGWHFSRDLTRHLVIGGCGHSTYLLSMAEITSGSSFEPNNPTEQKLGYV*
Ga0101562_1013787	Ga0101562_10137872	F010384	MLPQMGIWKRFIRSLSGVKRCRLSWGSGRGLFEVYQGCTDAASAGDLEEVY*
Ga0101562_1015103	Ga0101562_10151031	F049434	TLEDEQYVVIKAYKFTVFEIWRDFNVLSYIACLRYPYIRVYRLYDNAC*
Ga0101562_1017578	Ga0101562_10175781	F013612	MMSIRAMSLVLRFCVSRKGGTGVGGKGANSMAASGLVFGSDLVGTGRAISVLFSINGVRNKQSHLVGPPFPEFKACFSATAGWHFSRDLTRRLVIGGCDHSHVSVKYG*
Ga0101562_1017923	Ga0101562_10179231	F024258	MRLHVNYACAIGTRLNLLFVAQNGVVLELRRIAASQNCHSCQFANKRAERG
Ga0101562_1018385	Ga0101562_10183851	F068499	LVGSEKYSVRDFSAFGSHFQVTSGQMTSLPGHFCSPEVT*
Ga0101562_1020411	Ga0101562_10204111	F015565	MLLFCAKTIVKEPRKFELARLKKKKKEKHFGRLATFWFGAFAMLFSATGCVFRHESTRK*
Ga0101562_1021908	Ga0101562_10219081	F041611	MLELKFAIYYRAASLLSQASYAVLAEESLTRPGFFKHTPHTNSISNLGILRNNYISLPSDLCACV
Ga0101562_1022599	Ga0101562_10225991	F017963	MVMLSMAASGLVFRSDLVGTGRAISILFGINGVRNKRSHLVGPPFPEFKARFSATAGWHFSRDLTRRLVIGGCGH
Ga0101562_1023213	Ga0101562_10232131	F063409	QARSQGGFEGVRTNPPCSLAKFIFETAAVQGTIVQPCSGTVTDGIQAIMLQGVVTYTSPVEVFATGIKNFDR*
Ga0101562_1023253	Ga0101562_10232531	F073151	VSGFEKRGNLVQNAEFWHFSSYHLFKAVRASDFILSLEAHQAFCFINPTFEAVYSLLSEAVAVKPKV*
Ga0101562_1024559	Ga0101562_10245591	F059684	SHLEVAVEDQKLSYIVHFTAYKAVAHRSRQSRARK*
Ga0101562_1026783	Ga0101562_10267831	F015565	MKALCKTVMKALCNFELARPKKKNKEKHSGHLVTFWFGTFVILFHTTGC
Ga0101562_1027354	Ga0101562_10273541	F074458	MQSLTAKWFFEMAGIPSAVFVFDDDLATELETYAKANVKLLSRVVNVALASGDTFSESGLLHW*
Ga0101562_1028053	Ga0101562_10280531	F020857	VLFLQDYCALQESLMKMNFTIAVAPPFVHPMTSLPATPTHSAWKYGFFSEPTWRRQVAKYGNLKRCESLSFSGDIESLEPSKF*
Ga0101562_1028598	Ga0101562_10285983	F010384	MQTQLGIWKRFTTSLFVVNRCSLSWGCGRGLLEVYLGWTDAASAGDLEE
Ga0101562_1028648	Ga0101562_10286481	F010384	MQSQLGIWKRLIRSLLGVDRCSRCWGCGRGLLEVYLKWTDEASARDLEEVY*
Ga0101562_1028844	Ga0101562_10288442	F059684	LTGSHLEVAVEGLKLAYTVHFTSYKAVARRRRPSRDRK*
Ga0101562_1029003	Ga0101562_10290032	F074458	RSLTAKWFFEMAGIPSAAFVFDDDLATELETYAKANVELLSRVVNVTLASGDTFSESGLLHW*
Ga0101562_1029193	Ga0101562_10291931	F035204	MPMPPCEPVFQAIESGRDGDNLEKLSMEATVLNVHYVIHIIGFHVTFNET*
Ga0101562_1030639	Ga0101562_10306391	F010384	MQPHLGIWKRFIRSLSEVDRCNLSWGSGRGLLEVYQRWTDAASAGDLEEVYLKFISGGQN
Ga0101562_1030774	Ga0101562_10307741	F035204	MPPCKPVFQVIKLEHNGENLEILSMENTVLSMHYVIHIIGFHVTLMRPD*
Ga0101562_1032740	Ga0101562_10327402	F059684	LTGSYLEVAVEGRKLAYTVHFTFYKAVALSRRVSRDRK*
Ga0101562_1032917	Ga0101562_10329171	F017963	MNHPKGANRMAASGFVFRSDLVGTRRAISILFGINGVRNKRSYLVGPPFPEFKACFSATAGWHFSRDSTRRLLIDGCGQSHISANHGSNYLWEQF*
Ga0101562_1033587	Ga0101562_10335871	F073151	KRGNFAQNAKFWHFSSYHHFKAVRASDFILGLEAHQAFCFTNPTFEAVDSLLSEAVTVKPKV*
Ga0101562_1034152	Ga0101562_10341521	F007683	MMSLPAMSLELRFCVSRKGGTGGGGWVYPKDANSMAASGLILRSNLVGTERAISVLFGINGVRNKRSHL
Ga0101562_1034308	Ga0101562_10343081	F068499	PTASYSLVGSEKYSIRELSVFYSHFQVTSGQMTSLPGHFQSPEGT*
Ga0101562_1036749	Ga0101562_10367492	F024258	MRLHMNYACTIGTRPNLDLLCVAQNGVVLELCRIAASQNCHSCQFANKRADRGYYDESDIVL
Ga0101562_1037425	Ga0101562_10374251	F022150	GINGVRNKRSHLVGPPFPEFKARFSATAGWHFSRDLTRHLLIGGCGHSHVSVKYG*
Ga0101562_1037436	Ga0101562_10374361	F074458	RSLTAKWFFKMAGIPSAAFVFDDDLATELETYAEANVKLLSRVANIALASGDTFSESGLLHW*
Ga0101562_1038159	Ga0101562_10381591	F010384	LPAKQALTKGGQMQPQLGIWKRFIISLSGVDRCSLSWGSGRDLLEVYQGWTDADSAVDLKEIY*
Ga0101562_1038532	Ga0101562_10385322	F024258	VNCACAIGTRLNLNLLCVAQNGIVLELHRIKASQNCNSCQFANKRAERGYYDESDIV
Ga0101562_1038779	Ga0101562_10387791	F100481	VTMPLSSIKDLAVAISTRAGPAEDDPPLYKLGSKPIQAVCKGESGALN*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007050: Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', st7u

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences