Sample 3300007049

Basic Information
IMG/M Taxon OID	3300007049 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117787 \| Gp0124816 \| Ga0101554
Sample Name	Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', st32ic
Sequencing Status	Finished
Sequencing Center	University of New South Wales
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	57902845
Sequencing Scaffolds	40
Novel Protein Genes	45
Associated Families	43

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	28
All Organisms → Viruses → Predicted Viral	3
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	3
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1

Ecosystem Assignment (GOLD)
Name	Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
Type	Host-Associated
Taxonomy	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Stylissa Sp. → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Upa-Upasina 'control' site, Papua New Guinea
Coordinates	Lat. (^o)	-9.828217	Long. (^o)	150.820517	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F001905	Metagenome	619	Y
F004325	Metagenome / Metatranscriptome	443	Y
F006793	Metagenome	364	Y
F008560	Metagenome	331	Y
F008942	Metagenome / Metatranscriptome	325	Y
F013419	Metagenome	271	Y
F013777	Metagenome	268	Y
F015565	Metagenome / Metatranscriptome	253	Y
F016820	Metagenome	244	Y
F017657	Metagenome	239	Y

Scaffold	Taxonomy	Length	IMG/M Link
Ga0101554_1001254	Not Available	2785	Open in IMG/M
Ga0101554_1001266	All Organisms → Viruses → Predicted Viral	2762	Open in IMG/M
Ga0101554_1002010	Not Available	1979	Open in IMG/M
Ga0101554_1002068	Not Available	1939	Open in IMG/M
Ga0101554_1002531	All Organisms → Viruses → Predicted Viral	1689	Open in IMG/M
Ga0101554_1002535	Not Available	1687	Open in IMG/M
Ga0101554_1002700	All Organisms → cellular organisms → Bacteria → Proteobacteria	1623	Open in IMG/M
Ga0101554_1003055	Not Available	1505	Open in IMG/M
Ga0101554_1003842	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1312	Open in IMG/M
Ga0101554_1003915	Not Available	1296	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0101554_1001254	Ga0101554_10012546	F024330	MSQNDKLPAGTENYPVNNYIPKSNPNSRPKKFTKYAYVIKNQVEWDRMHKRYVVLEGKGKQETQPIPLLHKDNRKAYEDACDVCKWHYKNREARTLYVTDGTYISPTAIKRMRELP*
Ga0101554_1001266	Ga0101554_10012664	F037769	MSYIQTQTDKEDEKLLRRLLSEKMPEKDADKIISHVFSNLIKWTYEDAVLHLTQVFNFTEEESNQLIKEYDILSSTTKEVIMNPPPNFNATAPNDVKDYSANLWQARKCLSDAKKLINATALTPKDYENDEDFHEALLHRLHIAEHFISINKYIDEHLDFAKAHIPPQAP*
Ga0101554_1001266	Ga0101554_10012666	F016820	MTKKEFSYIVFSSCGDNVQEIHGVYKDLEGAAYGAKAALSTLFPNHGDKAEIIRCEIISTEEARVTYEKTKPKDIFEKCEDGFCPMPTPQSQEVS*
Ga0101554_1001266	Ga0101554_10012668	F088913	MTVPSQPKYKVNDRVRIRQVLKTSNRHVMINGKYVSAKIRRGVIKEVTLKQNSCGAKIPHYQVLWDHQSSPSLVSQHRIELENEVSKM*
Ga0101554_1002010	Ga0101554_10020102	F004325	MKHKKASTTEKADKFLQNIGTAGGAIGSPQLVGFGGMDTMSQVAAGNRDEYANIRMKQGDTRVVEGAKMPSDLDASYLKLNLPGSPLPANGLLVPQNLRAAERNQDMIGVSEQMFLAKYLPAAGLTQLPVGQPPLESKKGKK*
Ga0101554_1002068	Ga0101554_10020682	F087060	MYTIITTKPMTQSHTTSNDTSAKQVVRTLSCITQGKPVDTGDAPQTKKFDPVADQDNRLMQMLELSLAIKDKKSEYDDLRKSFTNDLKAALDDNEENPKIRHSENDRVHVYLSKRRVYKYSDKLTAKRLKLEAQMADLKDEEAKEVRHNKAELTKETFTVSFKG*
Ga0101554_1002531	Ga0101554_10025313	F064809	MLTTTFTGNITFAEIVTHDGQGNALDNPFLAAKIAVNDVNDNGLTIEIRTKNGLLKAAQNGENLVGTRVTVAGSIELASISSHWVDENGDLVARKKPQFRVYVNMIERHGRKQPAPAAATVQAELAV*
Ga0101554_1002535	Ga0101554_10025354	F090511	MLSPFKSKILQRLGLNHVAYHGNKNCNEDWLNGYFQAKKDLEMQLNQIMITTDDLD*
Ga0101554_1002700	Ga0101554_10027002	F068722	MKIEFDYKQGEWIQLKAYLFPYLHKSELVQDFVKKVNTKTRLRPMK*
Ga0101554_1003055	Ga0101554_10030552	F043451	MPNIQPWLYPQHPSPDRVAYTPTRSAHILEYQEEMIDAEGNVYWMTVDSTTLGGATSVKEFLEQMKDFYETKSCRKDKMQS*
Ga0101554_1003055	Ga0101554_10030553	F033839	MNNMSPITRAFLTVGIGVFLGILPVFMIINSLSTTAIKLCSRYGSDYTIVDLDTPLGTIKRCVAKD*
Ga0101554_1003842	Ga0101554_10038422	F017657	MMMDNNRKEALDKATKAKQKMAIEAEMMKQIQPTVPEVTAENIDMQPAIIPNPKPEGPVVGANVFNPGNLYPGISGTSKLAANWNPMMDPAAG*
Ga0101554_1003842	Ga0101554_10038423	F082820	MRKLIDGLAIASFVLSLTTVGAIGFGYLALTNKTNQEKIKNYAIGQVQKLLSDQLTKSIPSLPDATGDVVPVKPSLPKF*
Ga0101554_1003915	Ga0101554_10039152	F034580	MLALKNKQLTSSGQVTTKVSAGTNTLSAPARVVALNIKCGATQGKVDLIDNGSGGTVKYTIVTPAIGSGEDEYLQVNFPDTGLRFETDLFVFFNQATSVGVVYG*
Ga0101554_1003988	Ga0101554_10039881	F035204	MPMPPWSQYIESGGDGENLEKLSMETTVLNMHYVIHIIGFT*
Ga0101554_1004644	Ga0101554_10046442	F101300	FPNTGIESVIPGTRQDREGNVIDSRDNPGVFNDFGYAPTGNFYQVPEYNDDPEGSLSGLLYYQTRWCKHIYAALWSMKHDEGNDQFSFEGRYQQSGPNVTITIVNHGLLPDKRVAIDFTSGDLLDGQYVVSSVPDENTIVIVYPFSGTTQGDCTVSNLKIHEYVNTWLLEPNDQPAGNALEKFYKNFEKEQERTRKAAERMALLGYGLPWTGNKDVEFGQRNAPEEVAQFDPTLVTMKLTDTIRRDGRELSRDGRLLNNAASTLMSMQKVLNLDFKLIEDVRIGLVNQPLTDFTPDFQFGEIEGGVYLNGVPETGAGVSSMDCSTYNPGVEQSINVDAGLYLN*
Ga0101554_1004807	Ga0101554_10048072	F098759	HILTPILRLCLSLPTLVRQGYSAFFVSILSGESNELISMMKAWGYSSEKASGMISIKLV*
Ga0101554_1005014	Ga0101554_10050143	F031451	MTKRILKEGDRVRYSSTFCRTIGAVTGFTPQARGVITRLWGKGEFAEIVWDFPDPEGKLCGGAHVSALERLK*
Ga0101554_1005945	Ga0101554_10059451	F047732	MQRGYAICTTDLARILTIAPCKTKFIFVPITSGQVLTDAICFTDISNAKTIESRAKKKFEGMPETRIVNVALLYNRIDKQNELSNL*
Ga0101554_1007661	Ga0101554_10076612	F027869	MDTKKAKKAKNMAENALRMMALEEQMEAAQEADLQPEDGYINPMGRIGTVPPTTYSLGNMLNGTTTQSVINPET*
Ga0101554_1007882	Ga0101554_10078821	F013777	MTKTFTMWGPTSTAHFKNLHDHYLKKNHVVHAYATPYHNDPADNPAAMWSFVMHEKRDLERIAFKTYIHPQGDFQNGYYDICDIEKGTFDSDNMNLGEVYPVILYAHHETILTVGCVVKTSDHPDIHGKEQLALWIYYPSAENIESFDMASGHIYE*
Ga0101554_1009725	Ga0101554_10097252	F001905	MMFPFYIRMAILLCVGAFAPIIIHHIIMKLWDVSILRAAEYTFIACIPIAVWMAEKINERWNDEDK*
Ga0101554_1011223	Ga0101554_10112232	F059684	SHLEVAVEGRKLAYTVHFTSYKAVPRSRRQSRDMK*
Ga0101554_1011505	Ga0101554_10115051	F098759	PILRPCLSLPTLVPQGYSALFVSILSGESKELITMMKARGYSDEKASGMISIKLV*
Ga0101554_1011596	Ga0101554_10115962	F068499	RYSLLVSEMYSIREFSAFYSNLQVTSGQMASLPGHFRSPKVT*
Ga0101554_1011642	Ga0101554_10116421	F044550	MYVMGRKLVRARKLYYLIIDDESKYCLLKLDTESKDYIELDHDLDLFALSRLLFQQDHDHNNKRIQSKKE*
Ga0101554_1012381	Ga0101554_10123812	F032680	MSKYVGRIMDEVYDNFRNHFDDNEEKVWFLEELIEQLQTELEYYSNE*
Ga0101554_1013133	Ga0101554_10131331	F022150	LVGTGRAISILFGINGVRNQRSHLVGAPFPEFKARFSATAGWHFSSDLTRCLLIGGCGHSHVSVKYG*
Ga0101554_1014424	Ga0101554_10144241	F006793	MRRWILPNAHTTNTRGIMTNNRSTNEQIQERVNFAADELAKGKRAMDISKKLASKYNVSIQQARDYVRQAKPILTQSISPNDRAFIFSKVMSCLEQDRLDARKEENLKDQTKSTAGMVKMVSLLTSIDQVGSWDSAREAEGDYLFRNFSEVARKRKKYGDLDSLDNTTDSETPF*
Ga0101554_1015529	Ga0101554_10155292	F008560	MLKYFKVEDLIDSFHTDEKNKGRRYREFLYHCYTKFEKEIKKIKSKKIINRYITMRNNTLSHLIQNEKEITLKLSK*
Ga0101554_1015594	Ga0101554_10155942	F092220	MEPVKTIEPITEKDEIQKFQELKEQVFKEYADYSLNKLYNFNELLIDTIHQLQFKQMAMQELITHRLDNICPKETNSN*
Ga0101554_1016726	Ga0101554_10167262	F047978	TLLLFSLDATAGEVTEFKPRPAAVEQGSDTYVGILLSEEDFRKLLQDKIDTNAKVAECDVDKKVCTKLQEQYKLSIKNLQETIQKDNTWFKRNKGSLGLLTGVVIGVGTSIAIVRAVQPSQ*
Ga0101554_1017072	Ga0101554_10170722	F013419	MIRESKYSFLYRAHDGSIMKPENFLNINKGRTLSSSQLRMLGITKIKNPSYKRQASSRKLDKQPE*
Ga0101554_1018511	Ga0101554_10185112	F018810	MVNPQKPIVKLGTKLEKGVVTGIFHGKIEVTGEAGVQSLTFATVEKEVL*
Ga0101554_1018878	Ga0101554_10188781	F015565	MLLFCAKTIVKESRKFELAHLKKKKKEKHFGRLVTFWFGTFAMLFSTPGCVFRHENTRR*
Ga0101554_1021554	Ga0101554_10215541	F043240	MWSIEAQKKPWNKTGGMTPLMVSTASAEALKSSESETMPPIIAWLHNVT*
Ga0101554_1022623	Ga0101554_10226232	F058430	VKDTLNFTSTTFDVDVPSQSAANGNANVSLPVDFCFYLVSTGTITNINQFFPLFTQSIPQVSENQILSTTLTEKLPLINHPTVQSGALNFAGANNETAPKQRGLMLRRGQALYVAASGATALTNGFYCNIQGGFY*
Ga0101554_1022871	Ga0101554_10228711	F029773	MDILDKTLGEFVELFQGSNTYFGASKPLGQTRSRDGKQEFRHWVEPNPMTKEHWLQHLKGEAY
Ga0101554_1023479	Ga0101554_10234793	F008942	RRGLFEGVKEKAMSKKEKGRKWDGKSRVSNDLYRKNFEIIFGKKIDKDKEELEGYYIHDGKIDVLTKKKS*
Ga0101554_1023648	Ga0101554_10236482	F090258	MKKFNKMESNLICDSLDYYVAHLEAEIKALEEKGRTSIFAPGFYPMIKDELVNKIKQDMTKKQRV*HYT
Ga0101554_1027087	Ga0101554_10270871	F024258	MRLHVNYACAIGTRLNLDLLCVAQNGVVLELHRIAASQNCQSCQFANKRAERGYYDESDIVLCVKLLNTCFSL*
Ga0101554_1027813	Ga0101554_10278131	F023046	PFPEFKARFSATVGWHFSRDLTRRLLIGGCGQSTYLLSMAEITPGSSFEPSKPREQKLGYV*
Ga0101554_1027898	Ga0101554_10278982	F068499	ISLVGSDMYSRCNFLAFYIHLQVTSGKMTSLPGHYLSPEFT*
Ga0101554_1028296	Ga0101554_10282961	F100481	MYNHYPGSRGVTDIVSVTMPLLSIKDLAVAISTRAGPAEDDPPLYKLGLKPVQAVCKGESGALN*
Ga0101554_1029623	Ga0101554_10296231	F020857	ALQELLMKMNFTLAVAPPFVHPMTSLPAMPTHSVRKYGFFSEPTRWTQVANYGNLKCCESLSFSGDIESLEPSKL*

Showing 1 to 45 of 45 entries

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007049: Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', st32ic

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences