NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300006230

3300006230: Marine sediment microbial communities, 15.1 km from oil contamination, ambient, Gulf of Mexico ? BC155



Overview

Basic Information
IMG/M Taxon OID3300006230 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0116840 | Gp0121734 | Ga0082390
Sample NameMarine sediment microbial communities, 15.1 km from oil contamination, ambient, Gulf of Mexico ? BC155
Sequencing StatusPermanent Draft
Sequencing CenterYale Center for Genome Analysis
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size40049693
Sequencing Scaffolds9
Novel Protein Genes12
Associated Families8

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae1
Not Available8

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameMarine Sediment Microbial Communities From Different Distances From Oil Contamination, Gulf Of Mexico
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Sediment Microbial Communities From Different Distances From Oil Contamination, Gulf Of Mexico

Alternative Ecosystem Assignments
Environment Ontology (ENVO)marine benthic biomemarine benthic featuremarine sediment
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Sediment (saline)

Location Information
LocationGulf of Mexico
CoordinatesLat. (o)28.3Long. (o)-88.2Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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