3300005683: Enhanced biological phosphorus removal bioreactor viral communities from the University of Queensland, Australia - SBR4-V91802 Phage Sequencing

Overview

Basic Information

• IMG/M Taxon OID: 3300005683
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0111422 | Gp0115867 | Ga0074432
• Sample Name: Enhanced biological phosphorus removal bioreactor viral communities from the University of Queensland, Australia - SBR4-V91802 Phage Sequencing
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Queensland
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 64450275
• Sequencing Scaffolds: 26
• Novel Protein Genes: 26
• Associated Families: 23

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia savannae	1
All Organisms → cellular organisms → Bacteria	6
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. LAMO17WK12:I10	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	1
Not Available	8
All Organisms → Viruses → Predicted Viral	2
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium Athens0416_74	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Enhanced Biological Phosphorus Removal Bioreactor Microbial Communities From The University Of Queensland, Australia
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Lab-Scale Ebpr Bioreactor → Enhanced Biological Phosphorus Removal Bioreactor Microbial Communities From The University Of Queensland, Australia

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: St. Lucia, Queensland Australia
• Coordinates
  • Lat. (^o): -27.49999
  • Long. (^o): 153.012098
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000388	Metagenome / Metatranscriptome	1201	Y
F002371	Metagenome / Metatranscriptome	566	Y
F008498	Metagenome / Metatranscriptome	332	Y
F011936	Metagenome / Metatranscriptome	285	Y
F013067	Metagenome / Metatranscriptome	274	Y
F015419	Metagenome / Metatranscriptome	255	Y
F018530	Metagenome / Metatranscriptome	234	Y
F019483	Metagenome / Metatranscriptome	229	Y
F024268	Metagenome / Metatranscriptome	206	Y
F024534	Metagenome / Metatranscriptome	205	Y
F024972	Metagenome / Metatranscriptome	203	Y
F025940	Metagenome	199	Y
F032274	Metagenome / Metatranscriptome	180	Y
F043390	Metagenome / Metatranscriptome	156	N
F045770	Metagenome / Metatranscriptome	152	Y
F046981	Metagenome / Metatranscriptome	150	Y
F060838	Metagenome / Metatranscriptome	132	Y
F064858	Metagenome / Metatranscriptome	128	Y
F078533	Metagenome / Metatranscriptome	116	Y
F082381	Metagenome	113	Y
F083890	Metagenome / Metatranscriptome	112	Y
F091594	Metagenome / Metatranscriptome	107	Y
F100051	Metagenome / Metatranscriptome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0074432_100185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia savannae	7727
Ga0074432_100187	All Organisms → cellular organisms → Bacteria	44613
Ga0074432_100403	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	105255
Ga0074432_100670	All Organisms → cellular organisms → Bacteria	7349
Ga0074432_100802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. LAMO17WK12:I10	3082
Ga0074432_101492	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	2335
Ga0074432_101775	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	3584
Ga0074432_101983	Not Available	5720
Ga0074432_102787	All Organisms → Viruses → Predicted Viral	1539
Ga0074432_103611	All Organisms → cellular organisms → Bacteria	19300
Ga0074432_103810	All Organisms → cellular organisms → Bacteria → Proteobacteria	628
Ga0074432_106090	All Organisms → Viruses → Predicted Viral	2869
Ga0074432_108528	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium Athens0416_74	1007
Ga0074432_108859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1520
Ga0074432_110358	Not Available	668
Ga0074432_110724	All Organisms → cellular organisms → Bacteria	2075
Ga0074432_110725	Not Available	6894
Ga0074432_111375	Not Available	1278
Ga0074432_119886	All Organisms → cellular organisms → Bacteria	774
Ga0074432_123161	Not Available	857
Ga0074432_126767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	830
Ga0074432_128505	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	797
Ga0074432_141269	All Organisms → cellular organisms → Bacteria	972
Ga0074432_160656	Not Available	643
Ga0074432_162633	Not Available	729
Ga0074432_170373	Not Available	765

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0074432_100185	Ga0074432_1001859	F060838	MSFQYIQPTEEQKAIMQEFRDKFEALVADITSKVEPSRGLSLAKTKLEEAAFWLNKAITKNDN*
Ga0074432_100187	Ga0074432_10018743	F024972	MKITKVTKTYFETEGDRIYFFEPLDEEMTITELQELMDENEKFLLGEIQKMKKESITEPSVIYKNKKDCSNEKANKNQS*
Ga0074432_100403	Ga0074432_100403130	F018530	MAELQGVQLASSAMTAFVQVVRQYLRDHPLLNRLVAGEESSDRIIQWAVLDAVEDFNGTPPFSGFQLEDLLAKHQGSLLLRMTVIVLLESVGLLQTRNHINYSNGGVNVGVNDKTPMIMNWLQYFKSTTEQRKQHVKVAMNIESILGPNNPGVHSELWAINATYLSY*
Ga0074432_100670	Ga0074432_1006701	F078533	MTPAEFKRARETLCLSQNDLAEVWGMGDNGGRTIRRWECGERPLNPIAAYCLQLMLGEKAN*
Ga0074432_100802	Ga0074432_1008024	F025940	MATQKLNLTRDQLATFLKNHEQIKQFEKLFQVVDTLEPIXXXXXXXXXXXAQASANEALAQIAALALSTSVTDAVFEAKLQFALDAIPRLADALELLALAPIRNNVELAYDVSGILPLANLPASVRSNQVLTWLSM*
Ga0074432_101492	Ga0074432_1014923	F002371	MKLQRKKKEARGGTRKNAGAKPKYNEQTKTVAFRCPLSKIDELKMIVNSKLSEWSVK*
Ga0074432_101775	Ga0074432_1017754	F045770	MADLTKDAPLRIWGEIVSQKWLLDTSAAQTIYKGQPMIIDQSADTVNLCGFVDATVVAATDIFVGIAYXXXAVAIGAAETTEIEVLVEPTIVGFAGSVFTNADVGDTVYMSDSGTLSATAADNPMIGKLVRVKDGFQYVRLSSPTICAGA*
Ga0074432_101983	Ga0074432_1019833	F100051	MLERLICAVFGHRYVVERVLNLGARKVGCTRCNSHWAMHDGTRSFVRWDGEFEEFYAPGGILAQASGDVPPNVEFSGGAPLHGAASAGTQGYASEDQK*
Ga0074432_102787	Ga0074432_1027873	F082381	MKKKKENRGGKRDASGRKKADYKTKTIAFRVRVEWVETIKSMVKAKVAELSQNSS*
Ga0074432_103611	Ga0074432_1036117	F024268	MPISELITGTEAVSTTEHSLATDTSYDTGDAQTTDGVYQFFLDVSDMIAGDQLQIRIYEKVRSGDTQRIVYQAILTGAQSEPIWVSPALTLMHGWDVTCDALAGTITVNWSLRQIA*
Ga0074432_103810	Ga0074432_1038103	F013067	QANAVAPVAGIPSDAIVLVPGAVEILRFGAEAFFSGLASAANTVYVTPGEGL*
Ga0074432_106090	Ga0074432_1060904	F024268	MAIAELYSGQETALSTTEWDLPTDTSSLSAITTDGVYQVFLDVSDMVAGDVLRIRLYEKCRSGDTQRIAEEWTLSGTQSKPIWVSPSVILIHGWTFTITATAGTISVNWSVRQVA*
Ga0074432_108528	Ga0074432_1085282	F024268	MAISEQITGTKAVDTTEWSLADASTNGEAYSTATPITDDGVYQAFLDVSDMIAGDQLQIRVYEXXXSGDTQRIVYQAILTGAQSEPIWVSPSLVLMHGWDITCDALAGTITVNWSIRKVA
Ga0074432_108859	Ga0074432_1088593	F011936	LNEQLHETRLQKLEQGHDMLSRDYSRLNDAIVKISESLMALVVIQEQNKAIMSCIERQQSSIDKLDGRLDALEVQQPQLLELRSWVLGGFGTI
Ga0074432_110358	Ga0074432_1103582	F002371	MTLKTTIVTLLMKTKKQTRGGIRQGSGAKPKYKEQTKTVAFRCPMSKVDELKLLVKSKLSEWSVK*
Ga0074432_110724	Ga0074432_1107241	F043390	MGYMVKNEDSQKVITLTLTAEQLEVIDGALEMYCMGLAEQNDPHLEYAADAQEAIIDVLESNFGVEA*
Ga0074432_110725	Ga0074432_1107259	F032274	MQGSFDFTEQKEIVKREKRKPFEARQDWQRAPKIIVTDEYIALDKKLEPIEEELFDLIKKMPLAVEKKIKGKICVIPSGLKTDEELICRVRELRKQASKIGRELDELFFKTNPEWARFYEYTDLCES*
Ga0074432_111375	Ga0074432_1113751	F083890	LTAAKTPAQRQAERKARELAAGRVQWKRWVHPDDVPALAEYADKLARKRARAEQKAG*
Ga0074432_119886	Ga0074432_1198862	F024534	MSIEQRIEKLKDVFMLASLVQLKYVQDISEPNETNFKVSMAGGHEVFGKPEQYNAFIDKYLTWLEMRN*
Ga0074432_123161	Ga0074432_1231611	F000388	MRIIKVTKEYYETEDEKVYFFEPLEKEISVEDMQKIVDANEKLVKELKDNAVHG*
Ga0074432_126767	Ga0074432_1267672	F046981	MALGIEQIDDFVNSILQKFAGEERMAAQDISLPLQKYKYASRLFSGNIQKDTMSTSQCKWKVKIATNDNFQPVGLYHRDSSSRVNTLIEGSMKWALTTNNYHYDIDEEIFQTGGKQIYDYLKGLEDDLMTSFYTGMEDLMFGPGPSXXXXXXXXXXXLLWWITATDDSVSENNSEEGFDGYAPVGWGSNGVGGIDPIVYD
Ga0074432_128505	Ga0074432_1285051	F015419	MEYKVQITDEAGNIRHYNVSSSSFSEEKSLNDFILEALQISEDKRKLPLKIQCPNGLEVYPSIKMKFENYGGPILGDKLEAIHITWHDYNCS*
Ga0074432_141269	Ga0074432_1412691	F091594	MNDNGITTYCLGSGELKCDGCGQEKNWQALNQMPDALRKALQAQARRIDDTECILSGRPWYVA
Ga0074432_160656	Ga0074432_1606561	F008498	MSTVTYKNQPAIHATRGAVPLAGNSHLYTVKKVLWSDAIEDFLPSLFVGSVLHVCCGKSLLGDVRLDLDAENTPAIIGDGAKLPIASNGFDTVLCDPPYNGKFQWNHDLLAELARVASQRIIFQHWFIPANKHGLYKKAQHKFHLAEAYVWQGQAYFGRAQIISVFGSHLTMREADVAKAEAIQDMLDNGELAAVARMDCD*
Ga0074432_162633	Ga0074432_1626331	F019483	MASATGSAEIDFGAAPGSNEASVAVTGQTGIGATSKASAFIMGDDTTADHTALDHRYLAALLGLTCGTPTAGTGFTIYGRSEHKLTGRVAVRWVWVD*
Ga0074432_170373	Ga0074432_1703731	F064858	RRYRGRPDYLMANLNFATAADADIKALIVDMFEYHRWDEQKIEKSKAVRAALMKAVEVIVENVPPGPDRTVAIRKIREARMDCNSAITHDGKY*