3300005465: Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0025m

Overview

Basic Information

• IMG/M Taxon OID: 3300005465
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0114420 | Gp0111500 | Ga0068474
• Sample Name: Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0025m
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Hawaii
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 48610719
• Sequencing Scaffolds: 73
• Novel Protein Genes: 83
• Associated Families: 37

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus	26
Not Available	22
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Haifavirus → Haifavirus tim68	1
All Organisms → Viruses → Predicted Viral	15
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	3
All Organisms → cellular organisms → Eukaryota → Haptista	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Eurybiavirus → Eurybiavirus PHM2	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Marine Microbial Communities From The North Pacific Subtropical Gyre, Aloha Station
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine → Marine Microbial Communities From The North Pacific Subtropical Gyre, Aloha Station

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine biome → marine photic zone → sea water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Pacific Ocean
• Coordinates
  • Lat. (^o): 22.75
  • Long. (^o): -158.0
  • Alt. (m): N/A
  • Depth (m): 25

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000802	Metagenome / Metatranscriptome	885	Y
F001392	Metagenome / Metatranscriptome	707	Y
F001479	Metagenome / Metatranscriptome	687	Y
F002125	Metagenome / Metatranscriptome	591	Y
F002185	Metagenome / Metatranscriptome	585	Y
F002334	Metagenome	569	N
F003928	Metagenome	461	Y
F005118	Metagenome	411	Y
F006662	Metagenome / Metatranscriptome	367	Y
F006794	Metagenome	364	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0068474_100021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus	17043
Ga0068474_100056	Not Available	1679
Ga0068474_100083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus	4143
Ga0068474_100107	Not Available	2728
Ga0068474_100108	Not Available	2638
Ga0068474_100129	Not Available	2820
Ga0068474_100132	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae	3660
Ga0068474_100137	Not Available	1491
Ga0068474_101323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1341
Ga0068474_101565	Not Available	550

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0068474_100021	Ga0068474_1000218	F035799	VFKTINKSITSILLFMICFIKSGFLLFLDQDVDLFQVAALMDMRQLLDMVLGREGG*
Ga0068474_100056	Ga0068474_1000562	F063774	VPRAKRLEAARVCAFAARISTFAEHHLEEVARDNSLRRGDGRWRGHHSVDPSERRTERTFGSTGPGRAKLERGGVNLDHFGEEIRFENDSVLLAMVGIIATRAESAEAA*
Ga0068474_100083	Ga0068474_1000833	F035799	VFKTINKSITSILLFMICFIKSGFLLFLGQDADLFQVAALMDMRQLLDMVLGREGG*
Ga0068474_100107	Ga0068474_1001073	F068938	MQRLVSPELRVYTVSDREALGELVAELRLDKTLAGNLRQLLGYQTVGPGRQARQVAEDWQLLESVRWLRHLESGKLVPVVGSNAIRIFKRYCCPQTPDAR*
Ga0068474_100108	Ga0068474_1001084	F068938	MQRLVSPELRVYTVSDREALSDLVTELRLDSTLAGNLRQLLGYQTVGPGRQARQVAEDWQLLESVRWLRHLESGKLVPVVGSNAIRIFKRYCCPQTPDAR*
Ga0068474_100129	Ga0068474_1001293	F052657	MNATASASLELRSALQAHGDQLDTELRLLRELPQVYLTEKCVFDRGNGRIAKKRVAICSLRCCGEQLDQKSKCNDFSGERACPTVVDAVRFLRAKVENCHGVGRSRCISFDFFFD*
Ga0068474_100132	Ga0068474_1001324	F052657	MNATASASLELRSALQAHGDQLDTELRLLRELPQVYLTEKCVFDRGNGRIAKKRVAICSLLCCGEQLDQKCNDFSGERACPTVVDAVRFLRAKVENCHGVGRCISFDFFCD*
Ga0068474_100137	Ga0068474_1001372	F052657	MSASASLELESALQAHGDQLATELRLLNELPQVYLTEKCVFDRGNGRIANKRGAICCLLCCGKQLDQKCNDLSGERACPTVVDAVRLLRAKVEKSHGVGRCISCPVRN*
Ga0068474_101323	Ga0068474_1013232	F006794	MTTKAKTLLKVGIPLVIVIQLISITFLLARLNRDKAFSCKTAREYLVCRQVELP*
Ga0068474_101412	Ga0068474_1014121	F058218	DALKLQRWPLVDTAKMEKEKKEKDRKARLRRLYGLPEDKLKT*
Ga0068474_101565	Ga0068474_1015651	F000802	MTIEEYNELKLQDELMIGYEVEEDLPDDYDDESYVDGLLTDGFREVYDPLDELFGEPIAGYSLQ*
Ga0068474_101650	Ga0068474_1016503	F007173	MQTTTTKAIISRDNLMEYIHEDRDLLMGLQDDLSDMLSATGKFSITLDDIVQNFMPFFPLYLIENEEEIRQAFPDRVDDDHIFIYDRGMTPNEITLNVEWLD*
Ga0068474_101965	Ga0068474_1019653	F063774	MLYMRCRCEQLLSASRKRLEAARVCAFAARISTFAEHHRKEAARDNSLRRGDGRWRAGHHSVDPSERRTERTFGSTGPGRAKLERGGVNLDHFGEEIRFENDSVSLGMVGIIATRAESAEAA*
Ga0068474_102243	Ga0068474_1022432	F063774	MLYMRCRCEQLLSASCKRLEAARVCAFAARISTFAEHHLEEVARDNSLRRGDGRWRGHHSVDPSERRTERTFGSTGPGRAKLERGGVNLDHFGEEIRFENDSVLLAMVGIIATRAESAEAA*
Ga0068474_102478	Ga0068474_1024787	F031896	MPKAFRRFLKKLPKKIQTKNTHLESFYLPKYEMAVVVNKF*
Ga0068474_102623	Ga0068474_1026235	F082819	MDYTKNELALIDLISNLNKEFYYFGEEGDLIPSPRWEIRETVDKFVSQFMQSIESERDFIDD*
Ga0068474_102698	Ga0068474_1026981	F099424	MSKITFGYIVGGEDKHYNNLLRSLESLERIEQPYEVVILDADSRLETDEDKPNVRIIPFPVDEERGEGWFKPHYWQMRYHLNKFVETDHCF
Ga0068474_102698	Ga0068474_1026982	F002334	MTLGVFHQVYTRPKATEEAIKSFRQFHPDTLYVLICDGGKSFHRIAKRYNCLYVHEEDNLGYRDHTHASGIYGMTKEEVLEWLRRFRLACTLCNTDHILMMEDDILIRGEINVPETWEFAGQAKPGNLLQEEFMTYLTEKYGVEWNVNYYGTGGGSIFNARTFLENYERVIKIFEEEFDYIKENLCGNLGWVDVWMPMYYFLSGKKYRHNNLLTETTSNPIWTISREPIVHQYKVHYE*
Ga0068474_102698	Ga0068474_1026984	F045808	MMNGSYQAGAGREYCDWFYCGPHKRVQQFDPLQVFDDFYADGIRHMHDLVIETLRTLQIPHAVLDLKAWMMDRSKIR*
Ga0068474_102717	Ga0068474_1027173	F016534	VKDFELDFPQFACCFPRPNPHWIRNGSIFQKKQDFNIIVDFFFRSIQFPYLKEKFFKNLYIT*
Ga0068474_102916	Ga0068474_1029162	F056680	MWDYEISVHDDLDENTHTQYAELDENYARRESTDFQTLAYMHYAC*
Ga0068474_103019	Ga0068474_1030194	F060971	FGMGFWIDDQGLFISAPEFKDGSLDIANAIPVYDWENWGELTPHHHSHLMHVNQMCILKRDSQNIDYYAGVFGNA*
Ga0068474_103034	Ga0068474_1030342	F002125	FHQVMGLFLERKKLPQIYLLNFQTYLLHTAVIALVGEPSLTSVDLFVSKDTANLMFLRKLPQTIIEVQKVNK*
Ga0068474_103101	Ga0068474_1031014	F001392	MKHIINRADIIGGLKSVKLAKLYPQNYQPGVGVSEDFELLLNFKNGNRIN*RT*
Ga0068474_103591	Ga0068474_1035913	F006662	MRTLTTKEYELISQIYNSTDEIEASLSFEFGIQNDLYYQLFHSYEETKK*
Ga0068474_104094	Ga0068474_1040943	F005118	MNETSRAKRLIKLLERLLKKRELYDEDKLKLIKEQLKTAKNELAIIEEKTSKGFK*
Ga0068474_105811	Ga0068474_1058111	F068938	MQRLVSPELRVYTVSDREALSDLVTELRLDSTLAGNLRQLLGYQTVGTGRQARQMAGNWQLLESVRWLKHLLSGKLVPVVGSNAIRIFKRCCPQTPDAR*
Ga0068474_105924	Ga0068474_1059243	F035799	MKVFKTINKSITSILLFMISFIKSGFLLFSDQDVDLFQVVAHMDTRLLLDMVLGRVGG*
Ga0068474_106328	Ga0068474_1063281	F052657	MSASASLELECALQAHGDQLATELRLLNELPQVYLTEKCVFDRGNGRIANKRGAICCLLCCGKQLDQKCNDLSGERACPTVVDAVRLLRAKVEKSH*
Ga0068474_106344	Ga0068474_1063441	F063774	MRCRCEQLLSASCKRLEAARVCAFAARISTFAEHHLEEVARDNSLRRGDGRWRGHHSVDPSERRTERTFGSTGPGRAKLERGGVNLDHFGEEIRFENDSVLLAMVGIIATRAELAEAA*
Ga0068474_106681	Ga0068474_1066813	F016534	VKDFELDFPQFTGCFPRPNPHGIRNPSSFQKKQDFNIIVDFSLRSNQFPYLKSKFFKKQVIT*
Ga0068474_107447	Ga0068474_1074477	F016534	VKDFELDFPQFAGCFPRPNPHWIRNGSIFQKKQDFNIIVDFFLRSIQFPYLKKKFFKNLLIT*
Ga0068474_107647	Ga0068474_1076473	F016534	VKDFELDFPQFAGCFPRPNPHWIRNGSIFQKKQDFNIIVDFFFRSIQFPYLEKEVF*
Ga0068474_107908	Ga0068474_1079083	F041824	MRQNRPIYHLIDRSTTQAIGRGVEQVQELHHGKHVFQWKVIRIL*
Ga0068474_108152	Ga0068474_1081521	F063774	LSASCKRLGAARVCAFAARISTFAEHHLEEVARDNSLRRGDGRWRGHHSVDPSERRTERTFGSTGPGRAKLERGGVNLDHFGEEIRFENDSVLLSMVGIIATRAESAEAA*
Ga0068474_108428	Ga0068474_1084283	F071322	MITEDNKLPEAILVIANPIPRTNNGGISPKLKWANAKIKAETMMPEITPKSLERVGSKIPRNIISSNKGANRVVVKNNRKNDK*
Ga0068474_108878	Ga0068474_1088783	F016534	VKDFELDFPQFAGCFPRPNPHWIRNGGIFQKKQDFNINVDFFLGSIQFPYLKKKFFKNPLIT*
Ga0068474_109152	Ga0068474_1091523	F035799	VFKTINKSITSILLFMISFIKSGFLLFSDQDADLFQVAALMDMRQLLDMVLGREGG*
Ga0068474_109346	Ga0068474_1093461	F068938	MQRLVSPELRVYTVSDREALGELVAELRLDKTLAGNLRQLLGFQTVGPGRQARQVAEDWQLLESVRWLRHLESGKLVPVVGSNAIRIFKRYCCPQ
Ga0068474_109577	Ga0068474_1095772	F063774	MLYMRCRCEQLLSASRKRLEAARVYAFAARISTFAEHHRKEAARDNSLRRGDGRWRGHHSVDPSERRTERTFGSTGPGRAKLERGGVNLDHVGEEMRFENDSVLLAMVGIIATRAESAEAA*
Ga0068474_109935	Ga0068474_1099352	F052657	MSASASLELESALQAHGDQLATELRLLNELPQVYLTEKCSVFDPGNGRIANKQGAICRLFCCGKQLDQKCNDLSGERACPTVVDAVRLLRAKVEKSHGVGRCITISCPQFQLQLSNR*
Ga0068474_110265	Ga0068474_1102654	F052657	MNATASASLELRSALQAHGDQLDTELRLLRELPQVYLTEKCVFDRGNGRIANKRGAICSLRCCGEQLDQKSKCNDFSGERACPTVVDAVRFLRAKVENCHGVGRSRCISFDFFFD*
Ga0068474_110398	Ga0068474_1103984	F016979	MAGNTVQQEVVMEQNVIYVALFIPKEKRNLYVKSLKKFI*
Ga0068474_111001	Ga0068474_1110011	F063774	VPRASALTLEAARVCAFAARILTFAEHHLEEVARDNSLRRGDGRWRGHHSVDPSERRTERTFGSTRPGRAKLERTGANLDHVGEEIRFENDSVLLAMAGIIATRAESAEAA*
Ga0068474_111459	Ga0068474_1114594	F016979	MEENTAPQEAVMEQNVIYVVLFTQKEKRNLYVKSPKKLI*
Ga0068474_111865	Ga0068474_1118651	F063774	MLYLRCRCEQLLSASRKRLDAARVSAFAARISTFASTDLKIIARENFLRRGDGRWRGHHSVDPSERRTERTFGSTGPGRAKLERVGVNLDHCGEEIRFENDSVLLGMVGIIATRAESAEAA*
Ga0068474_111976	Ga0068474_1119763	F035799	VFKTINQSITSIILFLICSIKSGFLLFSDQDVDLFQVAALMDTRQLLDMVLGREGG*
Ga0068474_112125	Ga0068474_1121253	F013648	MIWGNKIILVMIFVSRTLLYIIMDKSKEDCITQVENYYCQRLTELVDLKMYDEAHAIFEEFSLGDDESYQWFFIKILEDTTNE*
Ga0068474_112217	Ga0068474_1122175	F045808	RMRTDLEFHDRVPLEACKANGLYMMNGSYQAGAGREYCDWFYCGSHKRVQQFDPLKVFDDFYADGIRHMHDLVIETLRTLQIPHAVLDLKAWMMDRSKIR*
Ga0068474_112243	Ga0068474_1122432	F068938	MQRLVSPELRVYTVSDWEALSELVTELRLDKTLAGNLRQLLGFRTVGRGRQARQVAEDWQLLESVRWLKHLESGKLVPVVGSNAIRIFKRCCPQTPDAR*
Ga0068474_113751	Ga0068474_1137514	F035799	VFKTINKSITSVLLFMICFIKSGFLLFLDQDADLFQVAALMDMRQLLDMDLGREGG*
Ga0068474_113840	Ga0068474_1138404	F087327	LVGLPSPSNINFQAPDNFGSEFFTKKVAAFSSHNIFGELKSLLFRALIYHF*
Ga0068474_114002	Ga0068474_1140023	F031896	MPKALRRFLKKLPKKIQTIKSHLESFYHPKYEIAVVVYKFLIYIFLIFIFLIKHSR*
Ga0068474_114309	Ga0068474_1143091	F087327	SPSNINFQAPDNCGSEFFTKKLEAFSSHNIFGELKSLLFSDLTDYF*
Ga0068474_114719	Ga0068474_1147192	F035799	VFKTINKSITSILLFMICFIKSGFRLFLDQDADLFQVAVLMDMRQLLDMVLGREGG*
Ga0068474_114960	Ga0068474_1149605	F035799	VIKTINKSITSILLFMISFYQKWFSPFLDQDVDLFQVAALMDMRQLLDMVLGREGG*
Ga0068474_115277	Ga0068474_1152776	F003928	MFTFTTTAYNSQGEALETETQTDSWSATEICLALSDIYGYAETLDAWGKHCGEYGDRPVALGQRVY*
Ga0068474_115297	Ga0068474_1152971	F007173	MQTITKAKISRNNLMEYIHEDRDLLMGLQDDLSDMLYATGKFSIDLNEIVNEYMPYIPLYLIENEDEIKEVYSDRIDDDDNLFIFDRDKTPTSINLYVEWID*
Ga0068474_115297	Ga0068474_1152972	F001479	MSKEMLFLCDVYDAWLIKNKLPHRCASEILYGADTMNKLTVNQSYWLESFISTWDVIADNT*
Ga0068474_115297	Ga0068474_1152974	F020546	MTTKTDPNKDFTIKEFYIKVKGDYGKEKTVRVNDMGDKLLTLITDLGWEYQRMSRSGQEVFDEIHQLLGTIKEDEVYMEI*
Ga0068474_115374	Ga0068474_1153741	F001479	MSKEMLFLCDVLTDWCKKNKLPHRCASDLLYSDDTKGRLTGNQVYWLENFISTWDII
Ga0068474_115374	Ga0068474_1153743	F012353	MTLYTSGDWKVDPNKDVTFPLVDWIVKLFPVIKDKEIEINQVDLDGEFAMGFCQDNDGEFLIHVHNGLDIREYVKTLIHEFTHVRQTIDGITDSNAREDEAYYLEEQLSKAFWDNNISGTQDVDL*
Ga0068474_115739	Ga0068474_1157391	F031896	MPKALRRFLKKLPKKIQTKNTHLENFYHPKYEIAVLVNKF
Ga0068474_116129	Ga0068474_1161292	F016534	LKDFELDFPQFTGCFPRPNPHWIRNASIFQKKQDFNIIVDFSLRSIQFPYLKKKFFKNTLIT*
Ga0068474_116250	Ga0068474_1162505	F035799	VLKTINKSITSILLFMISFYQKWFSPFLDQDADLFQVAALMDMRQLLDMVLGKEGG*
Ga0068474_116794	Ga0068474_1167941	F058219	MSKSKKQLKKDLKYLKKHLDDYKEINQNIKHTEKIGISSEQYFCEEFVFIPDGETPEECARFHDVEYLDITEFNYHHWISNKMEDY*
Ga0068474_117030	Ga0068474_1170308	F031896	MPKAFRRFLKKLPKKFQTINTHLENFYLQKYEKAIVVNKFLISIF*
Ga0068474_117246	Ga0068474_1172466	F031896	MPKAFRRFLKKLPKKIQTKNTHLESFYHPKYEIAIVVNKF*
Ga0068474_117326	Ga0068474_1173263	F097482	LFSSQNYISYNEVNLANYAHACFDKAMAEIVSKAITTNLLLQLIMNELILLKETLLDGKIFSSLII*
Ga0068474_117586	Ga0068474_1175861	F040682	FGVTLYKCPTLKESNNEKIVAPIIRNLKPKLNMKAAMVNMKRNIPKNPKILGVYSNSSKKDI*
Ga0068474_117803	Ga0068474_1178032	F002185	MVKGKLERKYKLIHNGRELSKGFLSEAGKYDAMQILVQRFDEGMEGAIDPDEVEIIDMSLKENQE*
Ga0068474_117954	Ga0068474_1179545	F032308	VIPSCFYSGDVSIKEGATLTVWVPIGAINNSDDLNLEINLVDVTRVEPINSPILY*
Ga0068474_118093	Ga0068474_1180931	F097482	LLSSQNYISYNEANLANYAHACFDKAIAEIVNKATTTNLLLQLIMNELILLKET
Ga0068474_118339	Ga0068474_1183392	F000802	MTIDEYKDLLLEDEINIGYDVEEDDLPDQYDDESYIDGLLTTGFHAVDASEMFGEEVVGYSLY*
Ga0068474_119459	Ga0068474_1194591	F078836	VNTYEIRASRITYDFYEIKANSLEEAEQRALCRTDKVNTLTTVSTVDYCKEVN*
Ga0068474_119459	Ga0068474_1194593	F014748	MEIGDRVQTLNTFVPITGEIVDMYLNLVTIADDDAETVDQLLSFHADDFEVIS*
Ga0068474_119700	Ga0068474_1197001	F016979	MAENTAPQEAVMELNVIYVVPFIQKEKRNLYVKSPKKLI*
Ga0068474_119871	Ga0068474_1198713	F035799	VFKTINKSITSILLFMISSIKSGFLLFSDQDVDLFQVAALMDMRQLLDMALGREGG*
Ga0068474_120927	Ga0068474_1209271	F080161	KPADIPAKRNPLGVTLLSSTNDQLESNWLKLFGILIHTNYSLILKKLSN*
Ga0068474_121044	Ga0068474_1210442	F006794	MTSKAKTLLKVGLPLVIVIQLISITFLLAKMSRDKAFSCKAVGNYFVCKQIELK*
Ga0068474_121052	Ga0068474_1210522	F006794	MTSKAKTLLKVGLPLVIVIQLISITFLLGKMSKDKAFSCKAVGNYFVCKQFKLK*
Ga0068474_121054	Ga0068474_1210542	F006794	MTSKAKTLLKVGLPLVIVIQLISITFLLGKMSRDKAFSCKAVGNYFVCKQFKIK*
Ga0068474_121055	Ga0068474_1210552	F006794	MTSKVKTLLKVGLPLVIVIQLISITFLLGKMSKNKAFSCKAVGNYFVCKQFKLK*