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Sample 3300004824
3300004824: Chicken cecum microbial communities from Brno, Czech Republic, of chickens treated with various antibiotics - Erythromycin treated
Overview
| Basic Information |
| IMG/M Taxon OID | 3300004824 Open in IMG/M |
GOLD Reference
(Study | Sequencing Project | Analysis Project) | Gs0114608 | Gp0114666 | Ga0071332 |
| Sample Name | Chicken cecum microbial communities from Brno, Czech Republic, of chickens treated with various antibiotics - Erythromycin treated |
| Sequencing Status | Permanent Draft |
| Sequencing Center | Masaryk University |
| Published? | N |
| Use Policy | Open |
| Dataset Contents |
| Total Genome Size | 16912732 |
| Sequencing Scaffolds | 2 |
| Novel Protein Genes | 2 |
| Associated Families | 2 |
| Dataset Phylogeny |
| Taxonomy Groups | Number of Scaffolds |
|---|
| All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Chlamydiales → Chlamydiaceae → Chlamydia/Chlamydophila group → Chlamydia → Chlamydia abortus | 1 |
| Not Available | 1 |
Ecosystem and Geography
| Ecosystem Assignment (GOLD) |
| Name | Chicken Cecum Microbial Communities From Brno, Czech Republic, Of Chickens Treated With Various Antibiotics |
| Type | Host-Associated |
| Taxonomy | Host-Associated → Birds → Digestive System → Ceca → Unclassified → Chicken Cecum → Chicken Cecum Microbial Communities From Brno, Czech Republic, Of Chickens Treated With Various Antibiotics |
| Alternative Ecosystem Assignments |
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal proximal gut |
| Location Information |
| Location | Brno, Czech Republic |
| Coordinates | Lat. (o) | 49.19522 | Long. (o) | 16.60796 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map |
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Associated Families
| Family | Category | Number of Sequences | 3D Structure? |
|---|
| F001813 | Metagenome | 630 | Y |
| F038012 | Metagenome | 166 | Y |
