NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300004755

3300004755: Marine sediment microbial communities from Formosa Ridge, South China Sea - G1-2



Overview

Basic Information
IMG/M Taxon OID3300004755 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0114441 | Gp0111473 | Ga0068403
Sample NameMarine sediment microbial communities from Formosa Ridge, South China Sea - G1-2
Sequencing StatusPermanent Draft
Sequencing CenterBeijing Genomics Institute (BGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size2776003
Sequencing Scaffolds2
Novel Protein Genes2
Associated Families2

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available2

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameMetagenomics Analysis Of Sediments Collected From Formosa Ridge
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Marine → Cold Seeps → Sediment → Marine Sediment → Metagenomics Analysis Of Sediments Collected From Formosa Ridge

Alternative Ecosystem Assignments
Environment Ontology (ENVO)marine benthic biomemarine benthic featuremarine sediment
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Sediment (saline)

Location Information
LocationSouth China Sea, southwestern Taiwan
CoordinatesLat. (o)22.11546667Long. (o)119.28443333Alt. (m)N/ADepth (m)1146
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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