Sample 3300003613

Basic Information
IMG/M Taxon OID	3300003613 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0110148 \| Gp0072755 \| Ga0007415
Sample Name	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_31 (Metagenome Metatranscriptome, Counting Only)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_31 (Metagenome Metatranscriptome, Counting Only)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	18609526
Sequencing Scaffolds	37
Novel Protein Genes	42
Associated Families	36

Dataset Contents

Total Genome Size

18609526

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	29
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Fiersviridae → unclassified Fiersviridae → Leviviridae sp.	2
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes	2
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Alismatales → Araceae → Pothoideae → Potheae → Anthurium → Anthurium amnicola	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Spiruromorpha → Filarioidea → Onchocercidae → Wuchereria → Wuchereria bancrofti	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

Not Available

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium

All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Fiersviridae → unclassified Fiersviridae → Leviviridae sp.

All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes

All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7

All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Alismatales → Araceae → Pothoideae → Potheae → Anthurium → Anthurium amnicola

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Spiruromorpha → Filarioidea → Onchocercidae → Wuchereria → Wuchereria bancrofti

Ecosystem Assignment (GOLD)
Name	Avena Fatua Rhizosphere Microbial Communities From Hopland, California, Usa
Type	Host-Associated
Taxonomy	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere → Avena Fatua Rhizosphere Microbial Communities From Hopland, California, Usa

Ecosystem Assignment (GOLD)

Name

Avena Fatua Rhizosphere Microbial Communities From Hopland, California, Usa

Type

Host-Associated

Taxonomy

Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere → Avena Fatua Rhizosphere Microbial Communities From Hopland, California, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	grassland biome → rhizosphere → soil
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

grassland biome → rhizosphere → soil

Earth Microbiome Project Ontology (EMPO)

Host-associated → Plant → Plant rhizosphere

Location Information
Location	Hopland, California, USA
Coordinates	Lat. (^o)	38.972988	Long. (^o)	-123.116539	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

Hopland, California, USA

Coordinates

Lat. (^o)

38.972988

Long. (^o)

-123.116539

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F001346	Metagenome / Metatranscriptome	718	Y
F001418	Metagenome / Metatranscriptome	698	Y
F003556	Metagenome / Metatranscriptome	479	Y
F005082	Metagenome / Metatranscriptome	412	Y
F007695	Metagenome / Metatranscriptome	346	Y
F008172	Metagenome / Metatranscriptome	337	Y
F010404	Metagenome / Metatranscriptome	304	Y
F018301	Metagenome / Metatranscriptome	235	Y
F021721	Metagenome / Metatranscriptome	217	Y
F024042	Metagenome / Metatranscriptome	207	Y
F026174	Metagenome / Metatranscriptome	198	Y
F026908	Metagenome / Metatranscriptome	196	Y
F027071	Metagenome / Metatranscriptome	195	Y
F027072	Metagenome / Metatranscriptome	195	Y
F029638	Metagenome / Metatranscriptome	187	Y
F030100	Metagenome / Metatranscriptome	186	Y
F034588	Metagenome / Metatranscriptome	174	N
F041557	Metagenome / Metatranscriptome	159	Y
F044324	Metagenome / Metatranscriptome	154	Y
F045561	Metagenome / Metatranscriptome	152	Y
F045595	Metagenome / Metatranscriptome	152	Y
F048143	Metagenome / Metatranscriptome	148	N
F048649	Metagenome / Metatranscriptome	148	Y
F056193	Metagenome / Metatranscriptome	138	N
F059436	Metagenome / Metatranscriptome	134	N
F071145	Metagenome / Metatranscriptome	122	Y
F076910	Metagenome / Metatranscriptome	117	N
F082288	Metagenome / Metatranscriptome	113	N
F086426	Metagenome / Metatranscriptome	110	Y
F089284	Metagenome / Metatranscriptome	109	N
F091449	Metagenome / Metatranscriptome	107	N
F092275	Metagenome / Metatranscriptome	107	N
F094015	Metagenome / Metatranscriptome	106	N
F100158	Metagenome / Metatranscriptome	102	N
F100491	Metatranscriptome	102	Y
F102609	Metagenome / Metatranscriptome	101	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0007415J51800_100038	Not Available	540	Open in IMG/M
Ga0007415J51800_100104	Not Available	575	Open in IMG/M
Ga0007415J51800_100131	Not Available	608	Open in IMG/M
Ga0007415J51800_100187	Not Available	716	Open in IMG/M
Ga0007415J51800_100537	Not Available	649	Open in IMG/M
Ga0007415J51800_100866	Not Available	555	Open in IMG/M
Ga0007415J51800_100970	Not Available	747	Open in IMG/M
Ga0007415J51800_101158	Not Available	742	Open in IMG/M
Ga0007415J51800_101232	Not Available	537	Open in IMG/M
Ga0007415J51800_102887	Not Available	1266	Open in IMG/M
Ga0007415J51800_102910	Not Available	572	Open in IMG/M
Ga0007415J51800_103630	Not Available	1093	Open in IMG/M
Ga0007415J51800_103714	Not Available	596	Open in IMG/M
Ga0007415J51800_103806	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
Ga0007415J51800_104035	Not Available	653	Open in IMG/M
Ga0007415J51800_104303	Not Available	1199	Open in IMG/M
Ga0007415J51800_104375	Not Available	745	Open in IMG/M
Ga0007415J51800_106710	Not Available	570	Open in IMG/M
Ga0007415J51800_106838	Not Available	791	Open in IMG/M
Ga0007415J51800_106951	Not Available	903	Open in IMG/M
Ga0007415J51800_107985	Not Available	588	Open in IMG/M
Ga0007415J51800_109274	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Fiersviridae → unclassified Fiersviridae → Leviviridae sp.	1773	Open in IMG/M
Ga0007415J51800_109635	Not Available	583	Open in IMG/M
Ga0007415J51800_109638	Not Available	677	Open in IMG/M
Ga0007415J51800_109885	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes	572	Open in IMG/M
Ga0007415J51800_112230	Not Available	756	Open in IMG/M
Ga0007415J51800_113128	Not Available	709	Open in IMG/M
Ga0007415J51800_113386	Not Available	501	Open in IMG/M
Ga0007415J51800_114242	Not Available	809	Open in IMG/M
Ga0007415J51800_114587	Not Available	581	Open in IMG/M
Ga0007415J51800_115011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	508	Open in IMG/M
Ga0007415J51800_117955	Not Available	619	Open in IMG/M
Ga0007415J51800_119673	Not Available	620	Open in IMG/M
Ga0007415J51800_122917	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Alismatales → Araceae → Pothoideae → Potheae → Anthurium → Anthurium amnicola	645	Open in IMG/M
Ga0007415J51800_125115	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Fiersviridae → unclassified Fiersviridae → Leviviridae sp.	735	Open in IMG/M
Ga0007415J51800_125634	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Spiruromorpha → Filarioidea → Onchocercidae → Wuchereria → Wuchereria bancrofti	638	Open in IMG/M
Ga0007415J51800_131297	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes	546	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0007415J51800_100038	Ga0007415J51800_1000381	F030100	RIIPGDWGKVESGWLAQLLRERIERSESGGRIHQFLWQRSRAVSKREKGTEGRGTIRNRSEFSQVARGSFESGRIAVTRG*
Ga0007415J51800_100104	Ga0007415J51800_1001041	F034588	LSFGGAGCESSRLPLRFTSPVSPTISIRVAPDAHPPVPADFRSESPRSSVPSGCPHRISGLLRRLALSFVARPFPKSPWFLLAQRRRFRPPRVASKPSSSADPYLLPQVAPASASTAGSMITPWLNRTLHPRLAPWMNLRYQSGTSIPYLTSSALLISIHCPQSADHEL*
Ga0007415J51800_100131	Ga0007415J51800_1001311	F010404	MQPFTLLQRRSALRQIPAAGSTLLAYIFEAALEFQLTRSASRSRPRLAFFRLAGLVHCESPVANFLS*
Ga0007415J51800_100187	Ga0007415J51800_1001872	F007695	VKRRDPWHRANALSKAAADPALSGKDAEKSYRRVLTWFASRWRNHQPKRAEKPHSKFSARKTLDGPATRPKTPLAVENSVGKLAVMRKQDA*
Ga0007415J51800_100537	Ga0007415J51800_1005371	F027071	RKSCSNLISFYQHSRSIFAALPCGGAVSSNAIDNNIELKLTTTPLRKQLPLFVQRRHRPSMPLAPALANLRSKHKRQHGNAPSGQRINFLRNHFTGKRFASSLPLHQLSLTLRIKIIGHFNKAKLNSTDTSLLAKLCISSANALANTLAIGNFTLLANHQTAVPEEISFDLLGPSNRRYCYPRSAAISASCPTNTSTPNRQGNSCKYCYLAEVIR
Ga0007415J51800_100730	Ga0007415J51800_1007301	F100491	MHGPNVASGTGETALCFPLKVLANRGSLRRCASALHSDRSPLLDATFRSTAPRTGLATDPRNCVNVPGLHLRNDPQIRSGPFGYVLPHPLCLLWLGGRDLHTNPLPNPTRLIARLRTSAPLRELSLPRDQSSQPDFELQSLPLQVARSSFAPRSAA
Ga0007415J51800_100866	Ga0007415J51800_1008661	F001418	SESGSKDLKGEAEFTSSSGGVRAPSVNAKKGLRSKERLETVPNSVK*
Ga0007415J51800_100970	Ga0007415J51800_1009701	F045561	AVLVDCRVRGLESEFRKEDGGSGQEARAGRRPDSRKANPCNGETLKTSCGGFIAVKVMGGAGVKASARCAEGVPGGAEAHEGRGSVGV*
Ga0007415J51800_101158	Ga0007415J51800_1011581	F027071	PQVTTELSQAIRDLSLSSILISSCPLIKRARKKIGSNLISFYLHSHSKIAALPCGGAVSPNAIDNNIELKLTTTSLRKQLPLFVQRRHLPSASLAPILANLRSKYKRQQSNAQSGQRINPLRNYSAGSCLAPSRPLHQSPSSLRIRITGNINKAKLNNIGTSLLAKNCAGGSITLAGSLAVSNLTLLANHQTAMPEKISFDLLGPLIRRYCYLRSAAASAGCPVNTTTPNKRANSRKYCYLAKVIR
Ga0007415J51800_101232	Ga0007415J51800_1012322	F007695	MAVLKKAPLNCEQSNLRVKRRDPWLEVNAPPKAVAVLELSGQDAETNYRRVLVWFAGRWRNHQSKRAEKPHSKSSGGNALDGPATRPETPLAVENSVGKLAAPEAPNASKGKRVWRTPIP
Ga0007415J51800_102887	Ga0007415J51800_1028871	F059436	GEPPGRNQRERSRAMNRSAEDGEWSSPHSGGEGTWVPPRRTKVCAGDTVGKSVSDPGRPGIVHREGMAGIVRHSQTKGRETGNAKPGLKPPMVGADISASEIPTEAVPGVGSGRGTQERGQSKRPRIAAGRAATPVGSKRSTGGGRPRAVWQRRRATSG*
Ga0007415J51800_102910	Ga0007415J51800_1029101	F021721	PGFTVRFSDPSACGRSLRGTVPRINRLSLAITAFQQVTGHSNRRVFIGTATLPEPESRYGLSLAHNDAFATIARSMFLACTFVSTPKTFANPFDPRLLRSVRFRGRTGAISTPGTRFPRRSPALLICPRSPLPFRSSFENPPDRSVQPVPFPGSPPYPTFDCLLLPAASSCDSATDRRLKPVSPGSTIVP
Ga0007415J51800_103630	Ga0007415J51800_1036302	F024042	MIEPVTRTHESGLVPRSSLSAEGKLRRAETALWGTSFRDEGKHGEPQDRQQGATPLHGRGGETVEVVRNHAGGTRGGLAAHPRRETRRRGPRASDSSASYDGGAIFGQPQERKSDRQVGPHGSGRDGKVGVKVRRVARVHGFVITRARS*
Ga0007415J51800_103714	Ga0007415J51800_1037141	F018301	MGMSLKVHQSDGTDNDDQGLSARDRKQLDRLGKLWKSDAERGLKTRHLMGKVLNEQVGPPARRKAHGKRVLELYGAELGIAPSDLNRMGWFSSLFPDFSDFRTQHPEIDSWTRFKTELPNLKPAKGGKARQPVVNPSNPALGGVARSFANLTSKLNGLDIQLVGAER
Ga0007415J51800_103806	Ga0007415J51800_1038062	F026908	LTWFAGRWRNHQSKRAEKPHSNSSGGNALDGPATRPETPLAVENGVGKLTAFRKEARLMSAREREHGEL
Ga0007415J51800_104035	Ga0007415J51800_1040351	F027071	RPQVTTELSQAYRVSFLSSILTSSCPLIKRARKKICSNPISCYQHSHSGIAALPCGGAVSSNATDYNIELKLTTTLLRKQLPLFVQRRHLPSMPLAPVLANLRSKHKRQQGNAPSGQRFDSLRNHFTGKRFASSLPLHQLLLPLRTKITGHFNKAKLNSTDTSLLAKLCISSANALANILAIGNFTLLANHQTAVPEEISFDLLGPRLTGHIATTGL
Ga0007415J51800_104303	Ga0007415J51800_1043032	F048649	MKKLIITLAALMVSIAAYGQGQFNFNNRIGTEVNARFVQASDATGQSSVGSPDWTVQLLGGPVGGTLAPLNPSSTTFRGAGGTASAGYVTSVAPIVPGVDVGGTAAIVVRVMGPGGITQDFPYTVANLGGGTVIPPNLQMGTTPLVVGVPEPTTL
Ga0007415J51800_104375	Ga0007415J51800_1043752	F001346	VKTFQKIGDIKNDTADLTMKSNLRVKRPDPWRRANALPKAVAVLELSGEDAQRKSQSCLCLVRKPVLQTPAKAS*
Ga0007415J51800_106710	Ga0007415J51800_1067101	F076910	RCQARSVQTYQVFRAQAGECRAVATVPYVPKSSRTAGPLMVSRCVSTGAPPVLGGHGDRQLAGSVHTYRVCRGTETLGPSSEVTRLRRSRNPARAILLDLANDTDEHVRPGNPAPANGSPSSNRGRLEEKPITLKARPHRSTVAPITGPRLGGRGSKEAHQKWPDLGVAPRGEGSVLPNVLGAVTEQAI
Ga0007415J51800_106838	Ga0007415J51800_1068381	F029638	ATVNLAITAPAAAGAGASVGSLSPGLPVIPGTAIFGIQVTCVATPSAVANSTLTIRKVDQFGQPLAASFSVQQGPFWVEVARVNLGPTLAQNPCATDGTQGTFNITGAGATCASVGVITPAVFAAGLPAGQYRVVEVAGPNSYCTLVQVYNGNQAQNQQLTLPYSGAMLTQPVTVNVPDANILDLQLTFVNSCVVPGGPSTATSQIAVVIGGSTPGLVNTSNVEISPAPGSDDDARLDIRIRDSASIIIPNAHVTVLIDKGAL
Ga0007415J51800_106951	Ga0007415J51800_1069511	F071145	MRKLASIAGAAFLALTALATPASAQGTMSAGGSCGMSAGDYGLSDINSHSVNPAGGHGVPALFYTVNYAGVPAPTTVGVIVRYNGELESQITVGSVTAPNAGGSFDGAIRANIDPDXPGLREQH*
Ga0007415J51800_107326	Ga0007415J51800_1073261	F086426	PEIDSWTRFKTELPNLKPAKGGKARQPVANPSNPALGGVARSFANLTSKLNGLDIRPVGAERQKLVDALRELAEAASRRLKIKVEVAVGVKESKPVVTKRTSLAARA*
Ga0007415J51800_107985	Ga0007415J51800_1079851	F082288	FRPNNKTKNMMSFLVLSSILGIAIVSTNAILTAQTVNAQFVVKLGGPDTDQVNSRIVGTLLKPGFTNKYNLTVNGKTIPIDYSVLDGSLVGILSDPSTKSLDLAVNPQANGAALEVNVPRHVIDSKNAAGKDAPFIVKVDGNRISGEPSGICVGTCPNILNSFKETHSTNTDRVLTVLVGPESRFIEIIGNHTSA
Ga0007415J51800_109274	Ga0007415J51800_1092741	F005082	SCYIVFDLPPAGYSNAEVLAEYTGFKTLFSATSDLMITKLLGGES*
Ga0007415J51800_109635	Ga0007415J51800_1096351	F044324	RRGSRRKPEELQAGKLEREGRLGIDVRAGDGDTLGIIAAGHTQHRREKIVNGDDGNDVVEVIRAEPEGAGTHEGTRTVVGGNTTAGVADPGSDESFEVDASQAGVGSNTDRKAAPTARKQRISTRDHG*
Ga0007415J51800_109638	Ga0007415J51800_1096381	F094015	EPDGRTEMTAKTGLFAVTAAAAIVTFAAGWAVSGTQAQVAAPSVQIEPLKIMTSAKLPPDQSTDYSVIFN*
Ga0007415J51800_109885	Ga0007415J51800_1098851	F005082	DVPPAGYTPAEALAVYTGFKNQFTGNSDSLIVKLLGGES*
Ga0007415J51800_111909	Ga0007415J51800_1119091	F100491	ALCSPPLVLANRGSVRRCASAFNPGRSPLLDATFRSTASRTGLATDPRNCVNVPGLHLRNDPQIFGPFGAALLPPLSLLLASRGAIYARNPLLDPISGLMTRLRIPAPLWDLSTPRDQSSQPGFEPSLPLQVARSSFAPRSAATIVSHHSSATDHRSRSATPCQARCP
Ga0007415J51800_112230	Ga0007415J51800_1122302	F008172	VAPGQRTVKSGGRPGANGKDAETQVTNVSLPGPQAGACKRQPKRAKRPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAAK
Ga0007415J51800_113128	Ga0007415J51800_1131281	F100158	AGLVAARLGNQQCSAGRNLEQVGDLERGKPGFRLATRCRLAKRTHEIFAKAMSGRGHEGALDGVEKENLEEDEAHEGIGRCVG*
Ga0007415J51800_113386	Ga0007415J51800_1133861	F045595	FYTVNYANIPAPTTVGVIVRYNGELESQTAVAMVTAANAGGSFDGAIRANIDPANQGFANSIDNSFRGRSDNGTVTFSGNESGNKNYAGYLRGGTGNSGTQAGIVPGEYVFYVYTGSVGDVYNVKDGTVARNAFIADEKGFLGWFSCGVSTDQGSGPG*
Ga0007415J51800_114242	Ga0007415J51800_1142421	F091449	MGFASLQHMRHRRYAFHGLCLPATFRLQGLATLLAVYSLRSRAGFVSHRPRSWDLPFGAFSSWKVTGRFRLGRTHIPFTRRYTRAPRCKGRLDEPQFLGFDPSESSWQSGVCLIRRLLGAPLGLTLPGLFADTLTGISPSLLSRASQQDLRLAAGASEFRSVSA
Ga0007415J51800_114408	Ga0007415J51800_1144081	F041557	LSYHMRANLFQSKGSSDPSLPTPDASPVQSNPFSSLAWDYAGPIAENVGIWTEWYSTNFNPVTTGAGSVGNQFGAVRNDEFDVRMAFNPGEGGNIVSIYYNNQSQTSPFFGAFGSGAPAGGQGQFIHFGGAAWLKDRVALEVNIGPGQDNLDYKRLNYGAVLALLPMNTDNMWLMPTVSILVGNDMTP
Ga0007415J51800_114587	Ga0007415J51800_1145871	F056193	CGTADPRFAGLPAPLRATSGVWVPPSRLPPSFLPTPFGAGASLGFSLQGVLLATISTPSGAPCPLGVFHVDSPRPHGERADAAAFRASIPSRARSAIPDPEGPGAPMPSWALTLQSVHSPLPSPPLWIAGDPLARIGRFDVPARLRLRVFRLEEIGCPLSGMPALMGFFTFRPSRHRGGRGGGRAHGFTSRLA
Ga0007415J51800_115011	Ga0007415J51800_1150111	F092275	AKKYPNGLYFCCYGYTLSGPSSFFGAAYATATQWTQAADADVTKLSAAVGYVSGDHTATLTLHSDSGSDTPGAKLGSRTGTTPEFFGGCCGVLTVKLKKPVHLSAGQKYWISITTGGANFNAAPFSTIDQVNPHNGAGSSNGGTTWSGFQSTLVATVSAK*
Ga0007415J51800_117955	Ga0007415J51800_1179551	F048143	REKPSNDMIDERLAAWQAGDYPEGWSVYDALGWSRDEYMTWLTDPSRVPERPLSALPDPEIYAPLERHENRA*
Ga0007415J51800_119673	Ga0007415J51800_1196731	F089284	LSICIISTLLISVPSTLISFHGVHAQNNLNSSKSNLGIKSIVPKFLQSLRKDISGHYSNPTFGIDDVAFPGGWHGRAIETEFGLLVNMHPGNESQYLRNLLNRENPVINPVILVQSLNNSIINKLSLPNFSISKNCKELAANSTSIINGKTFHVYTIECPFSKLFSRVSTNNQSGASANLGNNNTSTIPPKNFNINGVGQTKVYEY
Ga0007415J51800_120113	Ga0007415J51800_1201131	F102609	LKNADGGIGGTWPFADDAQFTLHIVPSLTSGVVVEPSTLEFSKSQANDPVQSFSIRHSNPRVFDAVRSYTLTYYVRFAGVTDLTDITSVVPQDAQNVLLSRYQIIPKFPHVLSYGWQKASFNLSHIPIAHVSFIPRLPSIDGDNHVRGATTPAGRVDFEPAVIVASPGQQVVEFHVKAQPGVDRDNLYYRVDWEVVGHADDTVNWVESLQRGGNGLSNSPKGGSLYFATWHLASAGVTTLSFVVLLAACLIALVNM*
Ga0007415J51800_122917	Ga0007415J51800_1229171	F003556	EIKIVHHREEATFLRKRFVPSVNCTLPVPSFGRVLAKLPVRSNFNAAVPDNDYMAGKLLSAAYEHRHISTLRTLLLETAEHMSATPYLDMRNQAMAYKYTAEELKTMTIEAKTIEPDYLSSFLHNVYGIWEKELFECYASVCDGILGYHRVNGTRGNRARHDPLILAPKLPRALWDTAFESLVAKDVSL*
Ga0007415J51800_125115	Ga0007415J51800_1251151	F005082	ADGLIQMLASHDYGKRNRHLLRINHSKLTADPFIPADNVKVSMSCYIVFDVPPAGYTTAEQLAVYTGFKNQFTASTDALISKLLAGES*
Ga0007415J51800_125634	Ga0007415J51800_1256341	F026174	NMEDLILQILKERLPQILAGLPLEWAKIPKDKQETAILIALHCCLNGPVGVNKQTTFPIVGSAKIKDLFGCTNSSWKGLCFIVATQVSVVNSKIDCGTMRRDGRYWPL*
Ga0007415J51800_131297	Ga0007415J51800_1312972	F027072	VVLDVSDVGYGTVSPYLGGLLKSLMSLWSRLAEESANQCCTSATRDIKTVASRFEHEGLSFLTITLPSLGKAFESWLDQGCVSIHP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003613: Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_31 (Metagenome Metatranscriptome, Counting Only)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences