Basic Information | |
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IMG/M Taxon OID | 3300001914 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0095509 | Gp0056904 | Ga0004716 |
Sample Name | Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample HSE6-05 |
Sequencing Status | Permanent Draft |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Published? | Y |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 253345860 |
Sequencing Scaffolds | 66 |
Novel Protein Genes | 68 |
Associated Families | 6 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida → Trichomonadidae → Trichomonas → Trichomonas vaginalis | 10 |
All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Tritrichomonadida → Tritrichomonadidae → Tritrichomonas → Tritrichomonas foetus | 5 |
All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia | 19 |
All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida → Trichomonadidae → Trichomonas → Trichomonas vaginalis → Trichomonas vaginalis G3 | 9 |
All Organisms → cellular organisms → Eukaryota | 6 |
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia | 1 |
Not Available | 13 |
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Hemiselmidaceae → Hemiselmis → Hemiselmis andersenii | 1 |
All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium | 1 |
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → unclassified Methanoregula → Methanoregula sp. PtaU1.Bin051 | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Bioremediated Contaminated Groundwater Microbial Communities From North Railroad Avenue Plume (Nrap), New Mexico |
Type | Engineered |
Taxonomy | Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified → Bioremediated Contaminated Groundwater → Bioremediated Contaminated Groundwater Microbial Communities From North Railroad Avenue Plume (Nrap), New Mexico |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Subsurface (non-saline) |
Location Information | ||||||||
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Location | Espanola, New Mexico, United States | |||||||
Coordinates | Lat. (o) | 35.9918 | Long. (o) | -106.0796 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map | ||||||||
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