NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300001665

3300001665: barSA



Overview

Basic Information
IMG/M Taxon OID3300001665 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0096604 | Gp0056110 | Ga0012983
Sample NamebarSA
Sequencing StatusPermanent Draft
Sequencing Center
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size7818637
Sequencing Scaffolds2
Novel Protein Genes2
Associated Families2

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides uniformis1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameMarine Microbial Communities From The Santa Barbara Basin, California, Usa
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Marine → Cold Seeps → Unclassified → Marine → Marine Microbial Communities From The Santa Barbara Basin, California, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)marine cold seep biomecold seepmarine sediment
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Water (saline)

Location Information
LocationUSA: California: Santa Barbara Basin
CoordinatesLat. (o)13.2648Long. (o)-59.4253Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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