Sample 3300001594

Overview

Basic Information
IMG/M Taxon OID	3300001594 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0047444 \| Gp0054589 \| Ga0011553
Sample Name	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes in water sample from Medicine Hat oil field -PW_MHGC_2012April2:
Sequencing Status	Permanent Draft
Sequencing Center	McGill University
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	1085936204
Sequencing Scaffolds	11
Novel Protein Genes	13
Associated Families	12

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	1
Not Available	8
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Priestia → Priestia megaterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Hydrocarbon Resource Environments Microbial Communities From Canada And Usa
Type	Engineered
Taxonomy	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Medicine Hat, Alberta, Canada
Coordinates	Lat. (^o)	50.033333	Long. (^o)	-110.666667	Alt. (m)	N/A	Depth (m)	800
Location on Map

Zoom:	Powered by OpenStreetMap^©

Family	Category	Number of Sequences	3D Structure?
F024321	Metagenome / Metatranscriptome	206	N
F031475	Metagenome / Metatranscriptome	182	N
F033483	Metagenome / Metatranscriptome	177	Y
F033819	Metagenome / Metatranscriptome	176	Y
F043669	Metagenome / Metatranscriptome	156	N
F058934	Metagenome / Metatranscriptome	134	N
F064732	Metagenome / Metatranscriptome	128	Y
F068209	Metagenome	125	Y
F070092	Metagenome	123	N
F094052	Metagenome / Metatranscriptome	106	N

Scaffold	Taxonomy	Length	IMG/M Link
Draft_10024532	All Organisms → cellular organisms → Bacteria	4380	Open in IMG/M
Draft_10047881	Not Available	2582	Open in IMG/M
Draft_10201542	Not Available	771	Open in IMG/M
Draft_10218281	Not Available	730	Open in IMG/M
Draft_10222248	Not Available	722	Open in IMG/M
Draft_10237168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Priestia → Priestia megaterium	695	Open in IMG/M
Draft_10265249	Not Available	656	Open in IMG/M
Draft_10303646	Not Available	615	Open in IMG/M
Draft_10313105	Not Available	606	Open in IMG/M
Draft_10352280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	573	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Draft_10024532

All Organisms → cellular organisms → Bacteria

4380

Open in IMG/M

Draft_10047881

Not Available

2582

Open in IMG/M

Draft_10201542

Not Available

771

Open in IMG/M

Draft_10218281

Not Available

730

Open in IMG/M

Draft_10222248

Not Available

722

Open in IMG/M

Draft_10237168

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Priestia → Priestia megaterium

695

Open in IMG/M

Draft_10265249

Not Available

656

Open in IMG/M

Draft_10303646

Not Available

615

Open in IMG/M

Draft_10313105

Not Available

606

Open in IMG/M

Draft_10352280

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium

573

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Draft_10024532	Draft_100245327	F043669	MDKLDLQSLISKMSIAADEEYQLTNSDKLAILSAFHKCEKWLIALQNEGIISISEQELEYLRDLADNVEGDISGKWSLDKPEYLAILITLQDYLNDIPCN*
Draft_10047881	Draft_100478812	F068209	MNTEAICYLLRKTSLTRSEIGKLKPDQLQAIVKEVYFQESIDEYRKMHSVASILAAIYNTIPQKPGHKALTAKDFXSGDMPTRDGKKPDTNVEILAKQKGIILPSK*
Draft_10110067	Draft_101100672	F103497	MAEADIVAKETRVTRGTKAEGEVSFQSSENAYTAPSITPETAWKYLTGNIHLRNQVINMQVQVFPGEPEIYVEDAEGEKVDDLSAWIAKQAAEAGVYPSMKVSWLECMGFGCSVKSPGYKFRGGKFEIDEIRDLPAISFRQAPHGLGMIAPPNPLVPGIVWDKKEQRTRVYQSSDDTLAQTELKNVSIIRDPSTPFPAGVAYCLPAYPVIAAIDHANHAADQQVHRVGAPLIFPQVTGIMTPDLKTWGDNFVKKWGKDTGFFLPDGITFPDVKIRESTTAKDRLEMLVHWLEAYFNPTTVLKREGNSIGGSDAGSMRIWNNFIGGTQSWIEEQYEAFLQPLLTANGYDDVYVRIQLKRP
Draft_10201542	Draft_102015421	F070092	MAINDRLKPVMELLETNXQKIGLMISHGMASDLAIERRKKELYDEVMTAKENAFKEELADLEGEIKKIEYSYHEPKKDPTTKLLEFEQIKAKIRSTPSKELKELTHKFQNTGAIPGIPWERPDHVDVLVAELRNRGLDEEADLTWDYAYNKLKVDRPWENNPLYKQLKSQHNKVSVLAGFKDMLKYLDGTNNAVYISEILKYKG*
Draft_10218281	Draft_102182812	F024321	MLEEILMIIAGMAGLGAFVSMLINLLKAIGLIKDGQGDKAFKIADLVVFVAVAVVYLLKMQVDWAQVNEWLVLLTALFGYVVSVFSGEFTHETIRGTPVIGYSYSEKKPKD*
Draft_10222248	Draft_102222481	F058934	MRQFSYPNSQFTNILGGASXGWKLNVYDTGTTNAASIYSNLAQTTPTANPVIADADGFLASFYWTGTIDVVLTDXNDNIIDSANGIQDLVSTINAVVVAGSITLPFGTAXGDGNTITTTLPIASDFSDGGVFVVRANTAN
Draft_10237168	Draft_102371682	F033483	VTPGDACVALDIDGLPVQLVLPERDVELMMWTYRANRILQEGRGDE*
Draft_10249114	Draft_102491141	F103499	ERGDVCETCDTKGCHRPATWEIECRGAGVSGRLIYSCDEHCPDPAILSPQDEMRRLVEK*
Draft_10265249	Draft_102652491	F094052	VTGIMTPDLKTWGDNFVKKWGKDTGFFLPDGITFPDVKIRESTTAKDRLEMLVHWLEAYFNPTTVLKREGNSIGGSDAGSMRIWNNFIGGTQSWIEEQYEAFLQPLLTANGYDDVYVRIQLKRPELDRSEVVAQQIQVGIAGKSITPEEIRRNLSELNLGEYSDEVAAVLEQTYAQAAPLIPFGNLAGFTRKEERTASAAERNDRRREPRPACRRSSA
Draft_10303646	Draft_103036461	F070092	MAINDRLKPVMELLETNRQKIGLMISHGMASDLAIERRKKELYDEVMTAKENAFKEELADLEGEIKKIEYSYHEPKKDPTTKLLEFEQIKAKIRSTPSKELKELTHTFQNTGTIPGIPWERPDHVDVLVAELRNRGLDEEADLTWDYAYNKLKVDRPWENNPLYKQLKSQQNKVSVLAGFKDMLKYLDGTNNAVYIS
Draft_10313105	Draft_103131052	F064732	MPKVSEFKWKDMEAEAEAATAAARERCTMPLAQSAERHVRFPSSPMAPGQFIAATATRSIDQPDHPEDTKLGIHPVMGLLYK
Draft_10352280	Draft_103522802	F031475	FIAYIKNQLLANLVTMTVMSSARTGAAWTLILSDDSKDILGTNLQQQREKLTQLDFLTLEMMGTSLEELRELLDEEELQAYFAFLRRHSSDLDSTSP*
Draft_10397931	Draft_103979312	F033819	MDASDSKQSRVTNTAIQSQLIELSVRLARMEKDIQEIKNNLSESGDKVISLEKSEAGRYPLIDRRLDNLEKRTDKHEDEIDQLVKITQSLAYTNKVLTWVAGLAGAGVLSWLIAQILSLIG*

Scaffold ID

Protein ID

Family

Sequence

Draft_10024532

Draft_100245327

F043669

MDKLDLQSLISKMSIAADEEYQLTNSDKLAILSAFHKCEKWLIALQNEGIISISEQELEYLRDLADNVEGDISGKWSLDKPEYLAILITLQDYLNDIPCN*

Draft_10047881

Draft_100478812

F068209

MNTEAICYLLRKTSLTRSEIGKLKPDQLQAIVKEVYFQESIDEYRKMHSVASILAAIYNTIPQKPGHKALTAKDFXSGDMPTRDGKKPDTNVEILAKQKGIILPSK*

Draft_10110067

Draft_101100672

F103497

MAEADIVAKETRVTRGTKAEGEVSFQSSENAYTAPSITPETAWKYLTGNIHLRNQVINMQVQVFPGEPEIYVEDAEGEKVDDLSAWIAKQAAEAGVYPSMKVSWLECMGFGCSVKSPGYKFRGGKFEIDEIRDLPAISFRQAPHGLGMIAPPNPLVPGIVWDKKEQRTRVYQSSDDTLAQTELKNVSIIRDPSTPFPAGVAYCLPAYPVIAAIDHANHAADQQVHRVGAPLIFPQVTGIMTPDLKTWGDNFVKKWGKDTGFFLPDGITFPDVKIRESTTAKDRLEMLVHWLEAYFNPTTVLKREGNSIGGSDAGSMRIWNNFIGGTQSWIEEQYEAFLQPLLTANGYDDVYVRIQLKRP

Draft_10201542

Draft_102015421

F070092

MAINDRLKPVMELLETNXQKIGLMISHGMASDLAIERRKKELYDEVMTAKENAFKEELADLEGEIKKIEYSYHEPKKDPTTKLLEFEQIKAKIRSTPSKELKELTHKFQNTGAIPGIPWERPDHVDVLVAELRNRGLDEEADLTWDYAYNKLKVDRPWENNPLYKQLKSQHNKVSVLAGFKDMLKYLDGTNNAVYISEILKYKG*

Draft_10218281

Draft_102182812

F024321

MLEEILMIIAGMAGLGAFVSMLINLLKAIGLIKDGQGDKAFKIADLVVFVAVAVVYLLKMQVDWAQVNEWLVLLTALFGYVVSVFSGEFTHETIRGTPVIGYSYSEKKPKD*

Draft_10222248

Draft_102222481

F058934

MRQFSYPNSQFTNILGGASXGWKLNVYDTGTTNAASIYSNLAQTTPTANPVIADADGFLASFYWTGTIDVVLTDXNDNIIDSANGIQDLVSTINAVVVAGSITLPFGTAXGDGNTITTTLPIASDFSDGGVFVVRANTAN

Draft_10237168

Draft_102371682

F033483

VTPGDACVALDIDGLPVQLVLPERDVELMMWTYRANRILQEGRGDE*

Draft_10249114

Draft_102491141

F103499

ERGDVCETCDTKGCHRPATWEIECRGAGVSGRLIYSCDEHCPDPAILSPQDEMRRLVEK*

Draft_10265249

Draft_102652491

F094052

VTGIMTPDLKTWGDNFVKKWGKDTGFFLPDGITFPDVKIRESTTAKDRLEMLVHWLEAYFNPTTVLKREGNSIGGSDAGSMRIWNNFIGGTQSWIEEQYEAFLQPLLTANGYDDVYVRIQLKRPELDRSEVVAQQIQVGIAGKSITPEEIRRNLSELNLGEYSDEVAAVLEQTYAQAAPLIPFGNLAGFTRKEERTASAAERNDRRREPRPACRRSSA

Draft_10303646

Draft_103036461

F070092

MAINDRLKPVMELLETNRQKIGLMISHGMASDLAIERRKKELYDEVMTAKENAFKEELADLEGEIKKIEYSYHEPKKDPTTKLLEFEQIKAKIRSTPSKELKELTHTFQNTGTIPGIPWERPDHVDVLVAELRNRGLDEEADLTWDYAYNKLKVDRPWENNPLYKQLKSQQNKVSVLAGFKDMLKYLDGTNNAVYIS

Draft_10313105

Draft_103131052

F064732

MPKVSEFKWKDMEAEAEAATAAARERCTMPLAQSAERHVRFPSSPMAPGQFIAATATRSIDQPDHPEDTKLGIHPVMGLLYK

Draft_10352280

Draft_103522802

F031475

FIAYIKNQLLANLVTMTVMSSARTGAAWTLILSDDSKDILGTNLQQQREKLTQLDFLTLEMMGTSLEELRELLDEEELQAYFAFLRRHSSDLDSTSP*

Draft_10397931

Draft_103979312

F033819

MDASDSKQSRVTNTAIQSQLIELSVRLARMEKDIQEIKNNLSESGDKVISLEKSEAGRYPLIDRRLDNLEKRTDKHEDEIDQLVKITQSLAYTNKVLTWVAGLAGAGVLSWLIAQILSLIG*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001594: Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes in water sample from Medicine Hat oil field -PW_MHGC_2012April2:

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences