3300001239: Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin

Overview

Basic Information

• IMG/M Taxon OID: 3300001239
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0047444 | Gp0054484 | Ga0011565
• Sample Name: Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin
• Sequencing Status: Permanent Draft
• Sequencing Center: McGill University
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 342840739
• Sequencing Scaffolds: 42
• Novel Protein Genes: 46
• Associated Families: 41

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10
Not Available	21
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	1
All Organisms → Viruses → unclassified bacterial viruses → Methanosarcina virus MetMV	1
All Organisms → cellular organisms → Bacteria	3
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Hydrocarbon Resource Environments Microbial Communities From Canada And Usa
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Fort McMurray in northeastern Alberta, Canada
• Coordinates
  • Lat. (^o): 57.01116
  • Long. (^o): -111.6
  • Alt. (m): N/A
  • Depth (m): 0 to .1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002995	Metagenome / Metatranscriptome	514	Y
F004260	Metagenome / Metatranscriptome	446	Y
F004466	Metagenome / Metatranscriptome	437	Y
F007025	Metagenome / Metatranscriptome	359	Y
F007685	Metagenome / Metatranscriptome	346	Y
F008498	Metagenome / Metatranscriptome	332	Y
F012606	Metagenome / Metatranscriptome	279	Y
F013086	Metagenome / Metatranscriptome	274	Y
F014494	Metagenome / Metatranscriptome	262	Y
F014503	Metagenome / Metatranscriptome	262	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Draft_10017235	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	515
Draft_10026203	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	685
Draft_10031096	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	643
Draft_10033724	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	657
Draft_10038813	Not Available	635
Draft_10055828	Not Available	684
Draft_10065332	Not Available	542
Draft_10067827	Not Available	748
Draft_10072773	Not Available	806
Draft_10072941	Not Available	685

Sequences

Scaffold ID	Protein ID	Family	Sequence
Draft_10017235	Draft_100172351	F014503	MGLIAYKGGWVRARKTSVHHWRFEDGKTCPNPGSKWEMEPPPRGWYCWVYPDDDNEFEAWMAKNCPTTDCTHRFNSGNPMYTVYIKDDTEAMLFNLRWM*
Draft_10026203	Draft_100262032	F024119	MAYVLGGANNEADGFTTAISNFALRAMHESQGLVNMTNVVTPTQGNTFLVPNFAPITYADYNPAGSGGTWGTGDAVVQNPALAQGSITATPAVATTAFDIFYGWTASFQLAATLGAELGVQFR*
Draft_10031004	Draft_100310042	F091069	DYKRSYNLTYVVRMWKRTDVKTPVVNRQDYTMYLENFAGMLWFHTDVHKWSSKVKTKYLEDLNLLQHLVNIPIVALVEEDNKKLAKFGEVTGWKVIDQMNLNNGKVGLVYTRSL*
Draft_10031096	Draft_100310961	F096288	YCTSVRERTIAVSTKKRRRCMAATPKIIQVSWIDAVADVGWESKTKAEIHHCITVGYLVDETDEALCLASTWSVDQTNARMHIPKAWIKNRKVLAREDTISQGKGTKSAKVGRKATVRKVSTVNRA*
Draft_10033724	Draft_100337241	F017273	MNKKPVAKKPAGKPMGYAKGGMTFKPCAGCPNAAKCKAAGK
Draft_10033724	Draft_100337243	F039997	MFPNGALMRCEAVPEGCVLVIEPEEPQEVDFPAVIDQTQAVQEAERGNKP*
Draft_10038813	Draft_100388132	F069847	MAIIWLKFKGYIIALASVIASVVAIYWAGRRQGYNSAENDAREADNAQARKIEDVADRVRRSDGNNVTAIERLRVARKLRDL*
Draft_10055828	Draft_100558281	F054030	IAFTGPIREVEGLAFASCTELYSADLVQTPAANATGLFSFTAKQVDKFPTQMEDATIEIEPKEDEVSIADIVSRLAALETAFGDYKSKMEMPAEEPAAEPMKEEMAAELSVISKLEAKLDSIISNFGAAPVKASVVAEEKAVEKFDLKAVINQKTEELGSRTEAIRFAMRNHREAYIEARDNNELNF*
Draft_10065332	Draft_100653321	F044988	EMLTPERVTELWPVLEPHFDAACKGNEIAKDELDAKDIYILAITGLVAIFVGFEDGEPACVMGIQFNTTNGRKCADVMALAGRGLMRFKAAYWHIILEWLKANEVEFLDAYAPERLAKIYMNRFGFNKSCMYVRMAL*
Draft_10067827	Draft_100678273	F045610	ETLQILTKDKPMMKKVAAEAVKGHEKKMHKMAKGGVTRADGCVSKGHTKGKMIAMKKGGAC*
Draft_10072773	Draft_100727732	F065428	MATETHDKLIKALQEYIKWQDRFEYKNSDEAGIKARYWLSEIRNEATMRRIEIQKKGNREKQPEKAW*
Draft_10072941	Draft_100729411	F079798	MSTNSQIAFNPIGETVVVAAAAVAPAGVQAPVYEKFNPQNAGQYRFVNAGSDTVFLGTGPTAAEAQANA
Draft_10074313	Draft_100743131	F041729	MAAKTFEGSVSIVLNTKGEIALKRDSEGKFNAGNAVECYDTMLKLAKSRKATINTYSLFIPENGSEPVLLANRYGNPYIALLPKRADGQAK
Draft_10091476	Draft_100914763	F029429	MTPSRLKLARAYLGYSLTDMADALRLSPTTGATTIRKMEAGKVNITGPISVAVDAMLKGYDPF
Draft_10095996	Draft_100959961	F002995	RIVSEIGNGSTDAGARKLYQMMNRVQKRRGKTVGKGKVAVDSKAYKEVDKL*
Draft_10100309	Draft_101003091	F074421	GEVDMMGAYDKKYQEALGQLNRLGTGLERNDAYRVGQASIKVNP*
Draft_10108714	Draft_101087141	F041590	AFTIDIPTSALPDTSTVPAQFRPLVDSALLDACEQTLNTFVTSKATAGNMQIPVGLFDLEKLLTATAQRRMTAALLIGMWRNSSKYVLEVAPKLTSQTGSALLRYQANIEKHEKRLAALTGKNPELNMSAEDLDKLMVNLAEADSETPYGEYLAQRTEEIRSKLVEDSEAL*
Draft_10109294	Draft_101092942	F060123	MAFSGSISSTTFNALKVVDHAFRRCRLPAQAITSEMQAYALESLYLLLSELANT
Draft_10139694	Draft_101396942	F041736	NRMRFVMATMLDVEHEWQNSKWKDKSDMIDPDKPMIVQVGDYGYEVQSCGGDGDIEGFVIQCKDAPVCKWEGMECIKL*
Draft_10144861	Draft_101448611	F075677	MKGENVMTINMMEVIANVTLTKVCSIKADKDSTEAKNINLKVKFDGAVLSSVFDKAVSGAVIAWQNGVGRKQFDTFKNNQTVEIQFSAPASRTAIDPEQAMITQLAGMTPEQQEAKVRDMVAKALATNQLRQEFNNIK*
Draft_10149401	Draft_101494011	F007025	MGGSFVILIDFFPEDCCKGTELTEGWYWYEDDGDELGGPYENEEAAIEAASNGKGW*
Draft_10149419	Draft_101494192	F017273	MPGMMMKKDKSAAKPMAYKKGGMVFKPCAKCPSPAKCKAAGQCALKAKK*
Draft_10162044	Draft_101620441	F041729	MSAKTFEGSVSIVLNTKGEIALKKDSEGKFSAQNAGECYETMTKLAKARKASINKYSLFMVENGSEPVMLANRYGNPYIALLPKRADGQAKRSTVTKLA*
Draft_10168547	Draft_101685471	F041590	METSTTYTITLTRTKVADVPAPLPMHTRIDTRTRKPESRAYTIDLPTAALPDTSEVPAQFRPLVDSALLDACEQTLNTFVTSKATAGNMNIPAHLFDLDKLLTATAQRRMTAALLIGMWRNSSKYVLEVAPKLTSQTGSALLRYQANIEKHEKRLAALTGKNPELNMSAEDLDKLMVNLAEADSETPY
Draft_10168795	Draft_101687952	F013086	MNERKLIGYTERDEGFYSMYEPANGSIVTQAFIMCKYCNGSIYHCMGPRYDAVCLTCYEKDPDER*
Draft_10179080	Draft_101790802	F085364	MAMVRLFVVQDNRRTFVDVPYGQHLETQADLEMQGANVYHAALLSAPPKVRNYRQAARLNQRLY*
Draft_10197028	Draft_101970281	F004260	MAVEDRLLGKLKADQQAFAFEALKRPVERDAFEYGYRVGMVAGYEAAIKALLDL
Draft_10203563	Draft_102035631	F092306	GLIMTMPATFYEGPGWQQSSEPILIVDVQEADIWPVDNRSGSGTKDQIDEGLHPIVAIGSQTAAGGRPLNLTGVVISCNISVHGTATDRVMVNIADGAIVRQYVANVLTYNMGAAATFEQAPVVGQPVYVDDSDDLSEGVTCSLSPLNDAGVRNPLAGYLWYCQDEIADGQVGGSRATSTFDTSLLNSLVEQEYCVLLVNAARELA*
Draft_10217934	Draft_102179341	F050213	MTYLIQLLKSRTVLFALLLAALSVVQGHIGLLPLTPVNQMFVGIGISVIITLLRIVTTQPIADK*
Draft_10227422	Draft_102274222	F083899	MTYYQKNRPRLLELARKYREGNRAEINRKQRERYATDDKYRQYQADYREEYRRLYGRVENNGPGKDTRSVN*
Draft_10230544	Draft_102305441	F008498	VANVTYKNQPAIDKTKGNVPLAGTSHIYRVKKRLWNDSIEDVLRGLFIGKTLHVCCGKSALGDVRIDADPENKPDIVCDAADMTACVADGAFETVLCDPPYNGQFQWNHDLLHELARVATKRIIFQHWFMPANPDGRYKKAQNGLRFRMCWYGS
Draft_10245490	Draft_102454902	F091069	VEANSVKTPVVNRQDYTMYLENFAGMLWFHTDVHKWSSKVKTKYLEDLNLLQHLVNIPIIALVEEDNKKLAKFGEVTGWKVIDQMNLNNGKVGLVYTRSL*
Draft_10275239	Draft_102752393	F014494	MATKHFECDECGARGKIVLKSDNQADECVYCPICSADIYEEEELDR*
Draft_10278801	Draft_102788011	F021289	YPVLFNDVSEFQIQYVHPLPQNEVIKCDSAGFGLVLMHRSIVPIMREKYPNQSMFMETAGGHDDQFIGEDIIFFRKMKAAGIPLHAHTGALVKHMKRFSLDYDYYGMYWTMDSIQKKMKEQPN*
Draft_10278801	Draft_102788012	F007685	VAGRDITEGRATRAIAVDVGVVSTSAIWQNTDVAYDVAVGGMPFIYANQRCTSLYPTDCTIPTR*
Draft_10316229	Draft_103162293	F088788	MQVTIPEEIRRIFPVEAGSRLSWSVEGDSLVARRIRGVKELQGCLTSNVPFPGAEAEKAAVAAQRAKHYAARNRRP*
Draft_10320845	Draft_103208454	F050470	VGLAARGARNLTGKIEKIEDQDALAQVRRQARRVVFKAFLAAIPLTLIAFALPQLW*
Draft_10327233	Draft_103272336	F025983	MAVNESRSLNSSLDEGATDGKYRKVRPNTTVDAGKGDQIVRANRRGLHPYWNYGFVDNEAVAKVNPVKPAGAGKSQKSTTPVFDIDVATQQY*
Draft_10328802	Draft_103288023	F065781	MNEGGRAGLWAVAYLLIVGVTAYFTIFMIIFSIIKTLVGVE*
Draft_10356499	Draft_103564992	F050470	VGLAARGARNLTGKIEKIEDQDALAQVRRQARRVVFKAFLASISLTLIALVLP*
Draft_10363706	Draft_103637061	F039125	MGDRANFGFRVNKDEPTLFLYGHWAGYEMLSQLAHALEAARPRWQDAAYGTRIAISHMIGTDWA
Draft_10446213	Draft_104462133	F064355	KKFSIFNFKLFYYLRQILGNEYPDSKSEVKKNKVVVEDNLRWQDDGGPVVEVVNTIDPASENYPTKPTDGTGSAL*
Draft_10455323	Draft_104553233	F019056	MSRQGLTARNPVWPAPGFEDTKLGVLMEPEVRHGTSEVYTRVQA*
Draft_10459116	Draft_104591162	F004466	MDEEKITGMYELLAAVEAVIQAADPAKREVLAETIDAYAEGPFGEEFFWATSGQAPTLLHLLLSEIDAACRPESQSKPRAAIRLVDRKPEGSA*
Draft_10475142	Draft_104751422	F012606	MAISDRRAVTVLLTDEHLSKMIEDHLLVENEIGDRVKVARIVQKLLDTSLGLPEKPWHDWDDWAKGFE*
Draft_10489401	Draft_104894011	F099198	MADAFTALVGAVIMIGYILLIAGKLAAPPLWICSLIGLALMLWAFWGDDWKPLLA