Basic Information | |
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IMG/M Taxon OID | 3300000425 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0053056 | Gp0053722 | Ga0026461 |
Sample Name | Marine microbial community from Union City, CA, USA - Pond 2C Liquid 2 |
Sequencing Status | Draft |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 131906500 |
Sequencing Scaffolds | 38 |
Novel Protein Genes | 42 |
Associated Families | 40 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
Not Available | 25 |
All Organisms → Viruses → Predicted Viral | 9 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae | 1 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium | 1 |
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Environmental Microbial Communities From Fremont, Ca And La Paraguera, Puerto Rico |
Type | Environmental |
Taxonomy | Environmental → Aquatic → Marine → Unclassified → Unclassified → Enviromental → Environmental Microbial Communities From Fremont, Ca And La Paraguera, Puerto Rico |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | marine biome → pond → sediment |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) |
Location Information | ||||||||
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Location | Eden Landing Ponds, San Francisco, CA, USA | |||||||
Coordinates | Lat. (o) | 37.569017 | Long. (o) | -122.102433 | Alt. (m) | N/A | Depth (m) | .11 |
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