3300000185: Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011

Overview

Basic Information

• IMG/M Taxon OID: 3300000185
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0047444 | Gp0053789 | Ga0010866
• Sample Name: Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011
• Sequencing Status: Permanent Draft
• Sequencing Center: McGill University
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 14461339
• Sequencing Scaffolds: 8
• Novel Protein Genes: 9
• Associated Families: 8

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	2
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	1
Not Available	2
All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Thermotogales → Thermotogaceae → unclassified Thermotogaceae → Thermotogaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Hydrocarbon Resource Environments Microbial Communities From Canada And Usa
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Syncrude, Ft. McMurray, Alberta
• Coordinates
  • Lat. (^o): 57.02
  • Long. (^o): -111.55
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F025775	Metagenome	200	Y
F031787	Metagenome	181	Y
F058179	Metagenome / Metatranscriptome	135	Y
F064744	Metagenome / Metatranscriptome	128	Y
F075043	Metagenome / Metatranscriptome	119	Y
F077343	Metagenome / Metatranscriptome	117	Y
F092306	Metagenome / Metatranscriptome	107	Y
F096626	Metagenome / Metatranscriptome	104	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Draft_c100124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans	7717
Draft_c100725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	2798
Draft_c103476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	1223
Draft_c104538	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	1050
Draft_c106791	Not Available	800
Draft_c108993	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Thermotogales → Thermotogaceae → unclassified Thermotogaceae → Thermotogaceae bacterium	595
Draft_c109252	Not Available	567
Draft_c109580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	530

Sequences

Scaffold ID	Protein ID	Family	Sequence
Draft_c100124	Draft_1001249	F025775	MKQLLTFQGFPMVVVVGMIVWSWISVLSVLIASFF*
Draft_c100725	Draft_1007253	F092306	MTMPATFYEGPGWQQSSEPILIVDVQEADIWPVDNRSGSGTKDQIDEGLHPIVAIGSQTAAGGRPLNLTGVVISCNISVHGTATDRVMVNIADGAIVRQYVANVLTYNMGAAATFEQAPVVGQPVYVDDSDDLSEGVTCSLSPLNDAGVRNPLAGYLWYCQDEIADGQVGGSRATSTFDTSLLNSLVEQEYCVLLVNAARELA*
Draft_c100725	Draft_1007254	F075043	MRKLLYAMQEIRKAQLAEQNAPTERLREVEDKFHYLDQGLNGIGKSAHPDERLAETMTSGDFTYAIQEFVQRKMYSSYQRQSFAFEPLVKTDTLPNYLPVTRYLDQAGVDDLEYVGEKAQARPGYMDDLTKRQWQVYRWEKQYDFSHEALVNDDLGYFDELTGKMGESARRTLEKFVSRFYTNATTIARLVGLGALYSTTGRLTTARISEARMAFNQRTDARGERIQSPLTHIVYHTGLADTVAQIQASMLVPELATNAANVIKGTFTAIEDPYIVGTAPNLPWYAFASGIKTFVLARRSGMAGPMILRKKSDIETATSLLGGGGAVDNIWGDFQSG
Draft_c103476	Draft_1034761	F075043	MRKILYAMQEIRKAQLAEQNVPTERLREVEDKFHYLDQGLNGIGKSAHPDERLAETMTSGDFTYAIQEFVQRKMYSSYQRQSFAFEPLVKTDTLPNYLPVTRYLDQAGVDDLEYVGEKAQARPGFMDDLTKRQWQVYRWEKQYDFSHEALVNDDLGYFDEITGKMGEAARRTLEKFVSRMYTNATTIARLVGLGALYSTTGRLTTARISEARMAFNQRTDSRGERIQSPLTHIVYHTGLADTVAQIQASMLVPELATNAANVIKGTFTAIEDPYIVGTAPNLPWYAFASGIKTFVLARRSGMAGPMILRKKSDIETATSLLGGGGAVDNIWGDFQS
Draft_c104538	Draft_1045382	F077343	MRYEEFTVENLTVGSIFNKYGNLITPGCNPSGGLDYFVDGNKSVNGTDGLSWGRAYNTLATAIAASDISIAATRNRWWARRNRIFVVGDALSENLVKFPTKCDVIGLGSYDGFTRAGLSGRHLPVGESYGTRFFNIHFKALAHASPIITLTNAAAGPQFRGCMFDGTLGTMTSAILSTACPFLVVDDCDFMGTFVTSYITFGAGEAGGTQITRNRMLGTAAKGIVAPGTTTASWMPLIQDNVIRATGMPIDEDAGVFYVVNNRLITDINIGTTTDGFDFSLALSCGNIMTGLNGVATTVPFA
Draft_c106791	Draft_1067911	F096626	AMPDTSEVPAQFRPLVDSALLDACEAVLNTFVTSKTTAGNANIPATLFTLESLLTATASRRMTSAMLLGMWRNSSKYVLDVAPKLTSMAGSALLRYQANIERHEKRIAALAGRSPELSLSAADLDKLMVNLADDDADTPFGTYLADRTEEVRSKLVEDSDAL*
Draft_c108993	Draft_1089932	F031787	MNASEREQMSARRVIHPATYRVRHDNGDTFEVRGLTLARVRKLIEAECQKRNWNIMDVDWWEVEK*
Draft_c109252	Draft_1092521	F058179	MTAENIALALWLTFIAACIMAFYLLADAATLSMTGSCTGQGFTNITIEADILMASINQTVNGTTWQIWGAP
Draft_c109580	Draft_1095802	F064744	LLLARLLAIEADMAVLRERVEELEDELHETWMGGTD*