NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300000052

3300000052: Coal bed methane well microbial communities from Alberta, Canada



Overview

Basic Information
IMG/M Taxon OID3300000052 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0047444 | Gp0053978 | Ga0010791
Sample NameCoal bed methane well microbial communities from Alberta, Canada
Sequencing StatusPermanent Draft
Sequencing CenterMcGill University
Published?Y
Use PolicyOpen

Dataset Contents
Total Genome Size283498382
Sequencing Scaffolds66
Novel Protein Genes91
Associated Families84

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available37
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage14
All Organisms → cellular organisms → Bacteria1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4
All Organisms → Viruses → Predicted Viral3
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata1
All Organisms → cellular organisms → Bacteria → Proteobacteria1
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2
All Organisms → cellular organisms → Eukaryota → Sar1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1
All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameHydrocarbon Resource Environments Microbial Communities From Canada And Usa
TypeEngineered
TaxonomyEngineered → Biotransformation → Microbial Solubilization Of Coal → Unclassified → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationAlberta, Canada
CoordinatesLat. (o)52.119Long. (o)-113.78Alt. (m)N/ADepth (m)686
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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