Basic Information | |
---|---|
IMG/M Taxon OID | 2149837022 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0047181 | Gp0052357 | Ga0010881 |
Sample Name | Human fecal microbial communities from the University of Arizona (HMP) - UAf2 |
Sequencing Status | Permanent Draft |
Sequencing Center | Chinese National Human Genome Center, Beijing |
Published? | N |
Use Policy | Open |
Dataset Contents | |
---|---|
Total Genome Size | 71414456 |
Sequencing Scaffolds | 6 |
Novel Protein Genes | 6 |
Associated Families | 6 |
Dataset Phylogeny | |
---|---|
Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii | 1 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:273 | 1 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales | 1 |
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → Alistipes shahii | 1 |
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales | 1 |
Ecosystem Assignment (GOLD) | |
---|---|
Name | Human Fecal Microbial Communities From The University Of Arizona, For Hmp Training |
Type | Host-Associated |
Taxonomy | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From The University Of Arizona, For Hmp Training |
Alternative Ecosystem Assignments | |
---|---|
Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal distal gut |
Location Information | ||||||||
---|---|---|---|---|---|---|---|---|
Location | Arizona, USA | |||||||
Coordinates | Lat. (o) | 32.23 | Long. (o) | -110.95 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map | ||||||||
| ||||||||
Zoom: | Powered by OpenStreetMap © |
⦗Top⦘ |