NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 2140918009

2140918009: Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3



Overview

Basic Information
IMG/M Taxon OID2140918009 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0063124 | Gp0051911 | Ga0026285
Sample NamePermafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size7377069
Sequencing Scaffolds3
Novel Protein Genes3
Associated Families3

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available3

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSoil Microbial Communities From Permafrost In Bonanza Creek, Alaska
TypeEnvironmental
TaxonomyEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil → Soil Microbial Communities From Permafrost In Bonanza Creek, Alaska

Alternative Ecosystem Assignments
Environment Ontology (ENVO)terrestrial biomesolid layerpermafrost
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Soil (non-saline)

Location Information
LocationBonanza creek, Alaska, USA
CoordinatesLat. (o)64.7Long. (o)-148.3Alt. (m)N/ADepth (m).3 to .7
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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