Basic Information | |
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Taxon OID | 3300031951 Open in IMG/M |
Scaffold ID | Ga0315904_10016062 Open in IMG/M |
Source Dataset Name | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 9209 |
Total Scaffold Genes | 7 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 6 (85.71%) |
Novel Protein Genes | 3 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 3 (100.00%) |
Associated Families | 3 |
Taxonomy | |
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All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater → Freshwater Fungal Communities From Various Locations |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Lake Erie, Ohio | |||||||
Coordinates | Lat. (o) | 41.6898 | Long. (o) | -83.2813 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F000258 | Metagenome / Metatranscriptome | 1443 | Y |
F078427 | Metagenome / Metatranscriptome | 116 | Y |
F097194 | Metagenome / Metatranscriptome | 104 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0315904_100160622 | F078427 | GGA | MVKSKGGILKESLVAQISAYVYYNVQVISKLTTNAAFKNKFREVIFNQLEKDFGEYVDAQARVKPKTLHHVYEWNQVGDSQSRLFKINKLNTEGLGFSISYEFLPSKTFTSTEGNRRHVFVSKASVMEAGMPLKIAPRHSKRLVFESNGYKVFMPEGASVVVKRPGGVGVKNSFMMTYSRFFKSNLVNASIKKSGFQRLFNNSMSKALRVPADIRTVKYTFNPNTIAVQADAALTSAFGASL |
Ga0315904_100160623 | F000258 | GGAG | MTVNYKLDAMLELRKYIWTKLQAAEIFNPDDYYSDNIGETLVPIIPVQQIPDMNQFLSGKDHIVYDKIGVSYDTLWLICNEQILFTIYSTDVSKINEVRNFMIDEFRRMDESAKDVNLSANFNSEKFKFHSIYVDDMSPTEPSQELQGFYSADIILEIKYSRITNTSGRYT |
Ga0315904_100160626 | F097194 | AGG | LGTWRNYQDLEESLSMPELLQTIESMQEKERQDKIFLASLQGVDLRDEQEEKGPTFEDIRLKAMGIEATTDDVVSLQGSMAAEAGFGIGAGLGYSKE |
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