Scaffold Ga0307997_10222126

Overview

Basic Information

• Taxon OID: 3300031706
• Scaffold ID: Ga0307997_10222126
• Source Dataset Name: Marine microbial communities from David Island wharf, Antarctic Ocean - #36
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 691
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (75.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-6 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Saline Lake Microbial Communities From Various Lakes In Antarctica

Source Dataset Sampling Location

• Location Name: Southern Ocean
• Coordinates
  • Lat. (^o): -68.5781
  • Long. (^o): 77.9617
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F056575	Metagenome / Metatranscriptome	137	Y
F090622	Metagenome / Metatranscriptome	108	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0307997_102221261	F056575	N/A	MTDDGELGNGTSAKVQFETYSNGAGVRLLAIGVTDHVAWESTSGPSADDEMFMVG
Ga0307997_102221262	F090622	AGGA	MQVEIKFTPDCEDDGFTGSTTVVRGNIVDLYDLGNALSHAVRAAGFTYVDNVAFEKEDGTMVFGDL