Scaffold Ga0302130_1128305

Overview

Basic Information

• Taxon OID: 3300031700
• Scaffold ID: Ga0302130_1128305
• Source Dataset Name: Marine microbial communities from Western Arctic Ocean, Canada - CB9_surface
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 800
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium BACL1 MAG-120619-bin26 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Western Arctic Ocean, Canada

Source Dataset Sampling Location

• Location Name: Canada: Western Arctic Ocean
• Coordinates
  • Lat. (^o): 77.9995
  • Long. (^o): -150.0065
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F072762	Metagenome	121	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0302130_11283051	F072762	N/A	MNEFLGFWIVIIVVVCMAWIWRKLKDIETHLKERDLVQEKHNKDIAAYLSSISQEAINQEWERKNKD