Basic Information | |
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Taxon OID | 3300031605 Open in IMG/M |
Scaffold ID | Ga0302132_10034428 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2689 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 5 (83.33%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Western Arctic Ocean, Canada |
Source Dataset Sampling Location | ||||||||
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Location Name | Canada: Western Arctic Ocean | |||||||
Coordinates | Lat. (o) | 77.9995 | Long. (o) | -150.0065 | Alt. (m) | Depth (m) | 121 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F083393 | Metagenome / Metatranscriptome | 113 | Y |
F106168 | Metagenome / Metatranscriptome | 100 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0302132_100344282 | F083393 | GGAG | MKLGKKVMKFADDYPLAVLALGTVGIMYAFENVGQMNGLGQATFKTSGTDMDTFFRKTGHTGTAAPGTGRWDTVMPSPSGPQVRYDAAYHTQAIMMDPELEKTLAERGKRPVVQSPSIRHGYEPTIFAGMRQRL |
Ga0302132_100344284 | F106168 | GAGG | MKLQRKIKTFYKRNTMLSIGLVGAAAYVYLQKQGMMTSLAPAPVKQATSAPVARYAYDTYAPIRNEPYTDASHFFGPADGDPVFYGF |
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