Scaffold Ga0119934_1041015

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0119934_1041015

Scaffold Ga0119934_1041015

Overview

Basic Information
Taxon OID	3300029937 Open in IMG/M
Scaffold ID	Ga0119934_1041015 Open in IMG/M
Source Dataset Name	Freshwater microbial communities from drinking water treatment plant - The University of Hong Kong - Raw_water_201207B
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Hong Kong
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	507
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Drinking Water Treatment Plant → Freshwater Microbial Communities From Drinking Water Treatment Plant - The University Of Hong Kong

Source Dataset Sampling Location
Location Name
Coordinates	Lat. (^o)		Long. (^o)		Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F011660	Metagenome	288	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0119934_10410151	F011660	N/A	MPAGRSGRRQIPPQDVARYWQSRAAGMSIKDASAIAGVHINTAAKWEAKKRKAAAEIQLATVEVGQVRKKQGGVQADQWKHAMDVADLPPVIPYDRLSPEAKQGWDDFDYFRRRYLGRVPSPWQVDAAYKIVKMLDSPEKEFICINCPPGAGKSTLFHDFAVWMIVRNR

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