Basic Information | |
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Taxon OID | 3300029930 Open in IMG/M |
Scaffold ID | Ga0119944_1000370 Open in IMG/M |
Source Dataset Name | Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Hong Kong |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 7840 |
Total Scaffold Genes | 24 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 11 (45.83%) |
Novel Protein Genes | 4 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 3 (75.00%) |
Associated Families | 4 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment Plant In Pearl River Delta Area, China |
Source Dataset Sampling Location | ||||||||
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Location Name | China: Pearl River Delta area | |||||||
Coordinates | Lat. (o) | Long. (o) | Alt. (m) | Depth (m) | .5 | Location on Map | ||
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F000744 | Metagenome / Metatranscriptome | 909 | Y |
F002243 | Metagenome / Metatranscriptome | 578 | Y |
F004314 | Metagenome / Metatranscriptome | 444 | Y |
F029725 | Metagenome / Metatranscriptome | 187 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0119944_100037016 | F004314 | GAG | MYDDYDLDYTYATDYSYDLDEYYAQDLDLDEDYARDGQDYESLAYRHYA |
Ga0119944_100037022 | F029725 | N/A | MTNRTELEWFLLEKCREDPDLFATVISEYVWNLSESKLDELEDFLSNNFGDD |
Ga0119944_10003703 | F000744 | AGGAG | MTEANVNLNVHEIGVILSALQLLNLRDENQIAREYGSVPALYNKLYSVFEQMDSSQTGLRNDVVPSF |
Ga0119944_10003704 | F002243 | GGAG | MPDFPTLQSKDGTMLVGFYPVATPYGDISQEWCMQILSWKGIDQISKKYLNRVEKSLAIRDRLAYDYVVTGDNQDLPQQGNPFYGAC |
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