Basic Information | |
---|---|
Taxon OID | 3300029930 Open in IMG/M |
Scaffold ID | Ga0119944_1000096 Open in IMG/M |
Source Dataset Name | Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Hong Kong |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 14004 |
Total Scaffold Genes | 22 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 13 (59.09%) |
Novel Protein Genes | 3 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (33.33%) |
Associated Families | 3 |
Taxonomy | |
---|---|
Not Available | (Source: ) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment Plant In Pearl River Delta Area, China |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | China: Pearl River Delta area | |||||||
Coordinates | Lat. (o) | Long. (o) | Alt. (m) | Depth (m) | .5 | Location on Map | ||
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F001190 | Metagenome / Metatranscriptome | 753 | Y |
F003889 | Metagenome | 463 | Y |
F082558 | Metagenome | 113 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0119944_100009614 | F003889 | AGG | LITNPKIRKKAFWVVGPEYIAIAITSIASALTGGTWVANRILDRQNERVQNAIDYTSSQKRRVDALEDQLNRLPLDYVLKVDFLREIQEMHDNFRQINVKLDKLMEKLLSK |
Ga0119944_100009618 | F082558 | N/A | MKRKKLVKKALKQPELYTPAEIAYFKRWLWQKKQDKKTAKIQLKQEANS |
Ga0119944_10000967 | F001190 | N/A | MADTSTDTSALLSDLPAGQTGIEGDYFDITKFEKLLNRLEASKGRQQRQKSLESRRDIFAQGLASMMSNF |
⦗Top⦘ |