Scaffold Ga0119944

Basic Information
Taxon OID	3300029930 Open in IMG/M
Scaffold ID	Ga0119944_1000069 Open in IMG/M
Source Dataset Name	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Hong Kong
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300029930 Open in IMG/M

Scaffold ID

Ga0119944_1000069 Open in IMG/M

Source Dataset Name

Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

University of Hong Kong

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	15665
Total Scaffold Genes	18 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	3 (16.67%)
Novel Protein Genes	6 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (16.67%)
Associated Families	6

Scaffold Components

Scaffold Length (bps)

15665

Total Scaffold Genes

18 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

3 (16.67%)

Novel Protein Genes

6 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

1 (16.67%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment Plant In Pearl River Delta Area, China

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment Plant In Pearl River Delta Area, China

Source Dataset Sampling Location
Location Name	China: Pearl River Delta area
Coordinates	Lat. (^o)	Long. (^o)	Alt. (m)	Depth (m)	.5
Location on Map

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Source Dataset Sampling Location

Location Name

China: Pearl River Delta area

Coordinates

Lat. (^o)

Long. (^o)

Alt. (m)

Depth (m)

Location on Map

Zoom:

Associated Families

Family	Category	Number of Sequences	3D Structure?
F004112	Metagenome / Metatranscriptome	452	Y
F010155	Metagenome / Metatranscriptome	307	Y
F032634	Metagenome / Metatranscriptome	179	N
F067666	Metagenome / Metatranscriptome	125	N
F079966	Metagenome / Metatranscriptome	115	Y
F101033	Metagenome / Metatranscriptome	102	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0119944_100006912	F079966	N/A	MAEVVTSEGLVLAVTNASGGVFPFACAKNATLSISRDTLELAPRTNGVFREYIQNRMSFTVSGNGLIKMAESNMQPITFFDTFIEGTDQEFLCYLDIIDKTGNYKVYQFTAFITSLSISSSVNEFGSYDYTLQGTGPLVEITSVDSYVVSSGKITARSTATFKLVAVGIEGKWYYNYTVTNEGGGVFTITIGTSFNGKTVKAAYISI
Ga0119944_100006913	F101033	AGGA	MEANFWLVIIVQTIALAISAAKIYMDMKIKVREHDLRLLTLEKKEDETVIQFNKIMDMLNEIKLQLKDKADKQ
Ga0119944_100006914	F067666	N/A	MIGEHNMAPIKKGDTYVITYAFYEDECETTPLDVSTYSFKLQAKNSAGTVMIQWLNADFVQINNYTRKVTLSPATTAGYTAGEFIYELEVTISSNKYTWMQGYIEVQNQVTS
Ga0119944_100006918	F032634	N/A	MTYRDLLILVENIKLNIGNQETKGQKKLFKIYEKLKPSIYEFQAKIEDARLDNAAVDEKGNLILNDKGEYNFNKEGLKKLKAELKKIEDSEFEFKKIEVANLEGLQPYWFLADFVNGVEFIMPEKQEEEEL
Ga0119944_10000696	F010155	N/A	MKDCSNSVRTIYINALNGNLSYNGKDVPVYGQNPFRTLPQNYVIISSITEQASNTNDSFGNVVSVDIDIYSEQYRVNDLSVVDNIAGQILNSLIPDTKIDGFSDSDFIVYPMSRTNSLYLPLYNGDNYVARKIITINNLVNQK
Ga0119944_10000699	F004112	N/A	MLKGFEDKKIDSYKQTRLLMYTMVRLMGDPKSSPKSPEQLWKLPGDEDITEINEEEYREIFKRLGK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0119944_1000069

Overview

Ecosystem & Geography

Associated Families

Sequences