Basic Information | |
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Taxon OID | 3300029889 Open in IMG/M |
Scaffold ID | Ga0246001_1006808 Open in IMG/M |
Source Dataset Name | Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Georgia Institute of Technology |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 4461 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (40.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat → Peat Microbial Communities From Marcell Experimental Forest Bog In Minnesota, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Minnesota | |||||||
Coordinates | Lat. (o) | 47.506 | Long. (o) | -93.454 | Alt. (m) | Depth (m) | .3 to .4 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F098491 | Metagenome | 103 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0246001_10068081 | F098491 | N/A | SHSDLVQTIRALDQLNRIRRLCPKGKPQWIKHYALTFASHPGSPILQFTFSKPGFCLVRRPTAINRLRHAETTKSFEAGTLDQTIIQEIISEYNSSMRNWEAEVERWNLQHGAALDAEMFLCPAYIYFKTSNSSPICNIAKQVHLALDGSQTRLGTDIWNGVLPAHRDELALLLQHLDQF |
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