Scaffold Ga0245251_100133

Overview

Basic Information

• Taxon OID: 3300029745
• Scaffold ID: Ga0245251_100133
• Source Dataset Name: Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37176
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Genomics Institute (BGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 151649
• Total Scaffold Genes: 188
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 73 (38.83%)
• Novel Protein Genes: 12
• Novel Protein Genes with Ribosome Binding Sites (RBS): 3 (25.00%)
• Associated Families: 12

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae (Source: IMG-VR)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Source Dataset Sampling Location

• Location Name: United Kingdom: London
• Coordinates
  • Lat. (^o): 51.5
  • Long. (^o): -0.12

Associated Families

Family	Category	Number of Sequences	3D Structure?
F042095	Metagenome	159	N
F057001	Metagenome	137	Y
F058555	Metagenome	135	N
F064725	Metagenome	128	N
F076653	Metagenome	118	N
F077313	Metagenome	117	N
F078005	Metagenome	117	N
F078006	Metagenome	117	N
F085718	Metagenome	111	N
F089592	Metagenome	109	N
F102167	Metagenome	102	N
F106193	Metagenome	100	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0245251_100133104	F057001	AGG	MPIQVPRARANLMTSKDLNKVQSEVKKASEKTLTGAVKAWCQLFKSGKEVNEILEENDIKVDKDIVPALVSLAKDKEVVIQLCKEILPRIDNTFCAYKEIEREYFDKLEQDKNIKTSVDKIENIAILGTNHKRFGYNEPVEYDGGIYYDVFNGQDKRIVKCAVPVKRYTFNLIAKCVTYYLTHPKNER
Ga0245251_100133116	F078006	N/A	MIRGQFPAPWHNLNVSSMEDNILKRAAAELKEAGCRVFAWQDDTYNRGWSKGDYIMLYYAFPDSPSIGYLSHGEYGMSVAYSRAYIPSRGSGSGCCVKEEATFDLETALDVLNGPLPRWCKAYGVYPKQYDNIDKWYNSDNHNKKLFKEI
Ga0245251_100133118	F085718	AGGAGG	MVIEFDFEIYKNGDYNKVYLRNGKEARVLCDNGKGNSPMVVMIEDDKADDYIILRYNETGRRNINGQSGLDLMLSIKEREPELWVVVISYMDNKDKRQKMVLPNFFSRNIGGNIYLQGSSKSNVSYYVGRLEEDGCFDELCEKIRVKRDRIYNMEIISPSDDKATV
Ga0245251_100133131	F078005	N/A	MKKSEFVKKLEKIIDMVKTEDDGFEYGGKVIFYKEDDSNYEVSVMNIEMNLEVEANVMAGMDDMDFTCLMSEVYKQKAAKAIMMEKDDDEDN
Ga0245251_100133160	F076653	AGG	MTIRDKYFGWKDIFFDRFVHCCNEKSDQPQGSNIPLAKINFDNKTGYVEDGTINIAELLQYLWINNKVYGCEYAPIDISSALQTLIRLTENAKHMFEDQPGVYDMIPYRGFFLRDDFLSGKDYSLDLDKIVSGMGGWYGEDEDPCYSMFVSQDQIWNLNPILKVLADEGSILAKELGYDINSYVSDNGYTIYNPYLSWINHYYHYCPTFNEDKLKPWDRVEDRKNKFKMTDKVKRGANNWYYSGGTISCVDNFMGKRYRKNLRTFIYRGIVFFLDRIWHTPLFEKMGVKMKYNAYYCYAATSGIWYNKGFKKRLAKRFNESLRGGGDLFGANLACMVCDHKDIDWEALRLWLDKYDEPTDKGMVNSPIQFMYLYLYYYFNK
Ga0245251_10013318	F077313	N/A	MGKYVIKRKIPKYQDAGEVDPVMPGNIVGLQGLGVEPLVSSTRIGFDIQQPDINTIDTSDLNAIVDSNKKVDESGSTDVFDFTTIPYYGADDIGSRFTQMGRGIGRMRSEGYGDLSTGVKTANVVGTVMSGIGGVLGLARNVFSGMASEQGTRTNIRLAQEREARQRRQSQMRYKDGGGVYLGPNNRFDSGSLTGEYLYPLPKSMEDQANVEVEKGEYVTQPGEAPMEAMGQKHADGGTPVSLEEGTKVITDDTTIESDFAKYIRDTYGIKATPKDTYATLMDRYKAKIGLKSAYDDQKKALDKLKKNDKIDDENTRRLNASVLSMAINDSNETVNGLEGRFTDFANVIYKEQEDRKMKKDEDTYFAKGGEIDNIISRSMKEYGLTEEDIAEAKKELLKKVAGIRQKMEKGGSSLFDYLLTFRPVENKYNNKDNTFGYQRQGQDGSYGGINTDERLEYYKTFMPLAYDAYMSAPKATAAKALQDAIYNTTGGWMGLATAENPIIANAEALRDYTTLVSFGGEDSQGNYPEDKKAAYHDRMRDNKFGQYSSSRPMIGLDVVTEDQHKALNDAGITHFSQLFSDKNKDIVNKILGEDMLKMQALRSMKGMEGLDFILDPHKVAPGPMDIGDVEDPDVKLDMPELIDPNTLPKTNTNVGKSNGGNGGRNIVGGGLDFPEVFRMTPGAVTTEGLERHYAPTVDPVLRSADQYMVEANRAFQSQLNQMGNVPDSQRGALSSNLQAIMSSNIGKYINEVEQGNVAQRTWADNVNSQSWANTYDKNIAQRQAYQQRILQGLAINDENWARYFDSVNDEIQQKWNTATTMNTLRSIFGDVKIGPNGQLIADPQGDILSYRRLYPAQEVTKGKKG
Ga0245251_10013328	F064725	N/A	MTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAVVKTSNKQAVLPSDFFDMLDAYRCEPLVCEIPGGDKAKADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITEKIYIGSHEVRFHYHHPVRLSIGRGLRRDCAADKYRDKYAWDNYDITISGNTMYTGFDGFIYIVYRATPKDEDGLPYIPETDLGYLEDYVETYIKMKIFENAAVNGLIQGAGEAYKLYAQQEPGKFARTMKELKMSMITLNDYRELAEDNRRRMLSHERMWPNAFDKYIKLI
Ga0245251_10013348	F106193	N/A	VGCNTCKEKALKAERERIERSMMNHSSSTVVSDMEYASRSTAGCMVMLDPLKTMERDVVSIYKQTRTIGDVGIVYLNMQKKIREWIKNLPYGCPPDEEVQEMRKEILDGCTKYIKP
Ga0245251_10013358	F042095	N/A	MAKTLYKYEASSNKFVWFTTWDRALRNYYSDDYNYVPDPVVDNPFNTYVEFRSRKPGMANVDWGDGIKEQFPMTKVQGRNDYRIIFRSLAIQYRKNPNTTWWFRKEDGSQYIPVDNHLYADGRRDVQRAVAIDFTCDIYYAEIKTCKMTAFPIVDTPGLESLIVHDTRYANDGIPVDKLSRSKKLTYISFENVGTRMTVMPEAITSKTEVYYLNMLNMLDLRDIESSGIRNIKNMKNLQELRLSSCYLDRYIKEFNDLPKLTLLSITPGPSDMWNYSDINTLPFFEVDKINPSINTFTFLDDWMNGERRTNWNDDNMSDRGLDHLTGFSVSHSNSIRMDKLPDYIYEMRSITWFGVNCSTHSQKRSDDFVDSFYRLVTEWDQITMTSVAKDGKRNQFYGLTVSMYSSIFPNENQRPSGTEQAPEGFVKGSSNGSPATPMEKIYVLKNNYAQKWTIKPV
Ga0245251_10013367	F089592	N/A	LVFIEENILILFFRKVTQKNKEMKEILKSRKVLAEVNGFNIMSDTLYEVVGKHDGSAPQAFQDANIAKAPFPENATHVCCPWDDFSKAYNTGFYPRSRCYNGLDKNEIDKLVKQRVDNIMKPFEEMSQMDLSQTNLEFWDDAKDKIFMGKVYNTANTVDLFYLYLAVFSGMLTPQEMDGDPVFMNSMFCFVEKDNMKDFVQQREINKMNISYKFISALKKGGDDRQAVIDLLLYIGIVTRPDFTEDEYYTGSLSNWMNEKKTNVDYLLDIWDRSLEGDFKEVLEFYRIVNVLQRNGRINMTPSGLQYNGQIIGPDVRTSAEFLATKKDFINIKANVLDEYEEIMSMSNIDDKSKTKKVKDIKKKDDVEEGDKIKEE
Ga0245251_10013381	F058555	N/A	MGDLHRLPIHPNNLFRIDETCIFAAKNLKKMSGTKITLLQKMKSNFDKILTEKYIPRNIQTKKDELGCVKLPAGSLICPVDFKPVTNKEGKKVTAIKYSSKHEEYHGSGIRISDECKMAMIYLIIINVLKHVFLRKRMQDGNRDQIEINTNDFIDILSDGCAYFCYRHVLRDSHEDINYQLISLKAWAEGEIRIALSDIIKYKHKASKVPRIKDMFVKKGESIYTCIDKNLDSDSRRRMANKSRKLDRVRILSKIIFRARTRNVHHIYKVTKRKTVKFNVAYLLNELNKKLIGIGMREISQSTIYRYISMFLDMCKKSISDLYDEVKKNNGVVNTKDRKNVTIGCLRLLYKGKYMHILISTEYIRDVFLGEKSSEMSKAG
Ga0245251_10013396	F102167	N/A	MFQEDSAILLFMIFIMDLSQIKKYLPSGWDVVDLIDHGIIDLDIMNGKMMGEYVAMLMIKACDDNGSHITTFSFHDKDMDTLRDMVRNSIVISSKRRILLGDGNTAIR