Scaffold Ga0245112_100127

Overview

Basic Information

• Taxon OID: 3300029584
• Scaffold ID: Ga0245112_100127
• Source Dataset Name: Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35583
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Genomics Institute (BGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 138895
• Total Scaffold Genes: 180
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 75 (41.67%)
• Novel Protein Genes: 18
• Novel Protein Genes with Ribosome Binding Sites (RBS): 7 (38.89%)
• Associated Families: 18

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae (Source: IMG-VR)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Source Dataset Sampling Location

• Location Name: United Kingdom: London
• Coordinates
  • Lat. (^o): 51.5
  • Long. (^o): -0.12

Associated Families

Family	Category	Number of Sequences	3D Structure?
F042095	Metagenome	159	N
F050794	Metagenome	145	N
F057001	Metagenome	137	Y
F058555	Metagenome	135	N
F064725	Metagenome	128	N
F075481	Metagenome	119	N
F076653	Metagenome	118	N
F077313	Metagenome	117	N
F078005	Metagenome	117	N
F078006	Metagenome	117	N
F080673	Metagenome	115	N
F083451	Metagenome	113	N
F083452	Metagenome	113	N
F085718	Metagenome	111	N
F089590	Metagenome	109	N
F089591	Metagenome	109	N
F089592	Metagenome	109	N
F106193	Metagenome	100	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0245112_100127106	F064725	GGA	MGLQTVEVFVIQLAREGRLDFFCITDSNTYLCAKDLNMTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAIVKTSNKQAVLPSDFFDMLDAYRCEPLVCEIPGGDKAKADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITEKLYIGSHEVRFHYHHPVRLSIGRGLRRDCAADKYRDKYDWDNYDITISGNAMYTGFDGFIYIIYRATPKDDDGLPYIPETALGYLEDYVETYIKMKIFENAAVNGLIQGAGDAYKLYAQQEPGKFARAMKELKMSMITLNDYRELAEDNRRRMLSYERMWPNAFDKYIKLV
Ga0245112_10012712	F078006	N/A	MDNTLKRAAAKLKEAGCRVFAWQDDAYNRSWSKGDYTMLYYAFPDSPNIGYLSHGEYGMSVEYSRAYIPSRGSGSGCCIKEEATFDLATALDALNGPLPRWCKAYGVYPRQYDNIDKWYNRDNHNKKLFKEI
Ga0245112_100127124	F106193	N/A	VGCNTCREKALRAERERIERSMMNHSSSTVVSDREYASRSTAGCMVMQDPLQTMERDVVSIYKQVRTKGDGVGVSYLNMQKKIREWIKNLPYGCPPDEEVQEMRKEILDGRAEHIKP
Ga0245112_100127127	F075481	N/A	MRLRISLRAVFCLGLSLFLSSCGSRRQVSDTSIDSRLISRIETMIDEAMDRRIVEIKTSDLNADIVITERKFDTDKDIDPATGERPVSSVTDAHIVIGRRDSTVTADSLGVNKTRNDIKDLDNKTNIKSKDVDDRKESRWPIVWIVAGILMILLVLVYILKKTKIL
Ga0245112_100127128	F089590	N/A	MKDKDMIERVGALWNIALAYGASCWAYFQPVHHLLTVLLIVLIANFLARLAQSVRGWKLRRSRRRRFSFKRWLREVRFTDILKEFALSCFIVMTLCVIYKTLYPIEEEASMILTVTKYGVYIALVGYVMLFLNTIGDAFADAYLVKVFKAVFKRINVFKMFGFSKNIPDETFGDIKKIADDEVKDKS
Ga0245112_100127131	F042095	N/A	MAKTLYKYEASSNKFVWFTTWDRALRNYYTDDYNYVPDPVVGDPHNTFVEFRSGKPGMANVDWGDGIKEQFPMTKVQGEDNYRIIFRSLAIQHKKNPNTTWWFRKEDGSQYVPIDNHAYADGRRDVQRVVSIDFTCDIYYANIQVCKMTSFPIVDMPGLEFLIVSNTLYVNDGIPVDKLSRSKKLIYIDLQSIGQRMTVIPEAITSKTEVYYLNMFNILDLRDIESSGIRNIKNMKNLQTLELSSCYLDRYIKEFNDLPKLTSLRIHLGPSDMWNYFDINTLPFFEVDKINPNINNFDFLNDWVGGERRTGWNDDNMSGRGLDHLTSFSVYHSNSIRVDKLPDYIYEMRSITWFAMNYSTHSQKRSDDFVNSFYDLVVGWDQITMASVAKDGERNQFYGLAVSMYGSQYPDENQRPSGTEQVPEGFVKGSSNGSPATPMEKIYVLKNNYAQRWTIKPE
Ga0245112_100127137	F089591	AGGAGG	MTIQEAYLRSLQKNEQNLANGGIKLDPGRFVLLFNEAQDRLIRYYLNRKDDETIRSIQTLLVYWKSLNKINHIDDPESTSFGLPDDYLWFSNIKGAFSYNGCEVGDFVIWEAKNENVHELLGDDNNKPSFDYRETFYTIGDGKVVVYQDGFRTDEVRMTYYRNPVRVDLAGYINAAGERSTDIDPELPDPLVEEILDMVAKQFNLNENELSRYRMDKDNVASFK
Ga0245112_100127138	F089592	N/A	MKDILKSKNVLVEVNGFNIMSDTLYEVVGKHDGSAPQAFQDANIAKAPFPENATHVCCPWDDFSEVYNTGFYPRSRCYNGMDKNEVDKLVDQRVNNIMKPFENISQKDLSQTNFEFWDDAKDKIYMGKVYNTANTVELFYLYLAVFSGMLTPQEMDGDPIFMNSMFCFIEKDNAKDFVQQREINKMNISYKFIDALKKGGKERQAVIDLLLYIGIVTRPDFTEDDYYTGSLSNWMNEKKTNIDYLLDIWDRSLEGDFKEVLEFYRIINVLQRNGRINMTPSGLQYNGQIIGPDTRTSAEFLATKKDLISVKANVLDEYEELMSISNIDDKTKTEKVKDVKKKEDVGEGDKEE
Ga0245112_10012714	F085718	AGGAGG	MVIEFDFEIYKNGDYDKVYLRNGKEARVLCDNGKGDRPIVVMVENDNTDDYIILRYNETGRRNINSQSSLDLMLSVKEREPELWVVVISYMDNKDKRQKMVLPNFFSKNIRGNIYLQGSSKSSVSYYVDKLEEDKCFDELCEKIRVKRDRIYNIEIISLSDDEETV
Ga0245112_100127150	F058555	N/A	MGTKIGILHIMKSNFDKIITERYTPRNIQVKKDELGCVKLPAGSLICPVDFKPVTNKEGKKVTAIKYSLKHEEYHGSGIQISDECKMAMIYLIIINVFKHVFLRNRMHGGNRDQIEINTNDFIDILSDGCAYFCYRHVLRDSHEDMNYQLISLKAWAEGEIMIALSDIIKYKHKASKTPRIKDMFVKKGESVYTCLDKKLDSNTRRWMANKSRKLNRVKMLSKIIFSARNRNINKIYKVTKKRTVKFNVSYLMDRLNIKLSKEGMMLISQRTVYRMIKEVLSMCCKTISDLYDEVKKNNGIVNTKDRKNVTIGHLRLSYRGKIMHIIIAEDFIKDVFLGVKGSEMSKAG
Ga0245112_100127169	F083452	N/A	MSGRVKIKSKDKDKKPKIDVFKVTENRFKNMNELRDLIDMDPRKGLVRIRDGAGFREVERGGCLHRNYLNLLEDELGAKLSIDLIERYIKR
Ga0245112_100127177	F057001	AGG	MINKELNRVQNEVKKSNERTLTGAVKAWCNLFKSGKEINDILKENDIKVSKEVVPALVALAKDKEVVIQLCKEILPRVDNTFCAYKEVEREYYDKNDKDKNKKLKMDEIEDIAILGSSHKRFGYNEPIEFDFGIYYETFNGTDKRIVKCAVPIKRYTFNLIAKCVTYYLTHPKNDR
Ga0245112_10012729	F078005	N/A	MKKSKFVKELEKVIDMIKAEDDGFEYGGKVIFYKEDDDNYEISVKNIEMDLMVEANTMASMDDRTFACLMSEVYKQKFTKAITMSEDDDDEDN
Ga0245112_10012748	F083451	N/A	MDKNEREKQVLDLLMSRRDIRKLVEKSNECYSKMDFVGAMKCRQEIKDIVDRESKIMLTKSESLVSLMNNADNEYKFNMLVWLHSMMCMADVFNGILEDFKDGVRKANGNSKFVKFDNLDRLMTECKKEIDCLMKGTSKSFQISFAVRSDELREMIENMVGDNIREGYDIFKEEAKMTKETDRSKIEEFNKRLDHE
Ga0245112_10012758	F076653	AGG	MTIRDKYFGWKDIFFSRFVHCCNEKSDQPQGSNIPLAKINFDNKTGYVEDGTINIAELLQYLWINNKVYGCEYAPIDISSVLQTLIRLTENAKFIFDDQPGIHDMIPYRGFFLRDDFLPGKDYSLDLDKIVSGMGGWYGEDEDPCYSMFVSQDQIWNLNPILKVLADEGSILAKELGYDMNSYVSDNGYTIYNPYLSWINHYYHYCPTFNEDKLKPWDRVEDRKNKFKMTDKVKRGANNWYYSGGTISCVDNFLGKEYRKNLRTFIYRGIVFFLDRIWHTPLFEKMGVKMKYNAYYCYAATSGIWYDKGFKERLAKRFNKSLGGDGELFGANLACMVCDRKDIDWEALRLWLDKYDDPTDKGMVNSPIQFMYLYSYYTFNK
Ga0245112_1001277	F080673	AGGA	MDEIELLRLQDEALSYLRDNITKDEAYYVLTTDKDMIEILIADKKDGSKRIKILDMEYTIEKDDMLLLFDTDGIIDECLLAASYIGVNMYFRRQDVNAILNNINREKVMKYPYIAIQLDNIQTIEKRRVIFEITGHRIDDNKEKIDFMFVYFMARIL
Ga0245112_10012793	F050794	GAG	MNVNLINKINDFNNVQLDAFLHRKIMQDLRIQRVKVLMMLYTSNYFVDVRQKQLLDHTYALSRDQAFDYMTEFNKRLSDKVGIKCTMDVLLPTDDDNANIIIEHNGIIKKLMKEAEKLELDTDAIKVMMRDLLDELKDDIDLNILIFDVSQLLIKYNLFRLEAITEQEFKNSFVRMDSRNMEIKKLTLSDIKKVVMMMEDRYDYALYMTEEYN
Ga0245112_10012797	F077313	N/A	MSKYVIKRKIPKYQEAGEVTPIMPGNVVGLQGIGVEPLVSSTQIGFDIQQPDINTIDTSDLSALVDSNKKVDKSGSTDVFDFTTIPYYGADDIGSRFTQMGRGIGRMRSEGYGDLSTGAKTANTITTIASGISGIMGLARNVVSGIASEKGTRTNIRLAQEREARQRRQSQMQYKDGGGVYLGPNNRFDSGSLTGEYLYPLPKSMEDQANVEVEKGEYVEQPGEAPMEAMGQKHADGGTPVSLEQGTEVITDDTTIEPDFAKYIRDTYGIKATPKDTYATLMDRYKAKIGLKSAYDDQKKALEKLKKNDKIDDENTRRLNASVLSKAINDSNDTVNGLEGRFTDFANVIYKEQEDRKMKKDEDTYFAKGGEIDNIISRSMKEYGLTEEDIAEAKKELLKKVAGIRQKMEIGGTSLFGRKLTFRPIENRFNNDPNYFGYQRQGTDGSYGGINTDERLNYYKTFNPAAYDAYMGASEGTRARALQDAIYGQTSSWMGLATAENPIIANAEALRDYTTLVSFGGEDSQGNYPEDKKAAYHDRMRDNKLGLFTTSRPMIGLDVVTEEQHKALNDAGITHFSQLFSDKNKDIVNKILGEDMLKMQALRSMKGMEGLDFILDPHKVAPGPMDIGDVEDPDVKLDMPELIDSNTLPKTNTNAGKSNGGNGGRNIVGGGLDFPEVFRMTPGAVTTEGLERHYAPTVDPVLRSADQYMVEANRAFQSQLDQMGNVPDSQRGALSSNLQAIMSSNIGKYINEVEQGNVAQRTWADNVNSQSWANTYDKNIAQRQAYQQRILQGLAINDENWARYFDSVNDEIQQKWNTATTMNTLRSIFGDVKIGPNGQLIADPQGDILSYRRLYPAQEVTKGKKG