Scaffold Ga0167332_1005150

Overview

Basic Information

• Taxon OID: 3300029446
• Scaffold ID: Ga0167332_1005150
• Source Dataset Name: Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP13 - Kappala-digested 114
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Gothenburg
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5637
• Total Scaffold Genes: 7
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (14.29%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Biosolids → Sewage Microbial Communities From Wastewater Treatment Plant In Sweden

Source Dataset Sampling Location

• Location Name: Sweden
• Coordinates
  • Lat. (^o): 59.355554
  • Long. (^o): 18.227079

Associated Families

Family	Category	Number of Sequences	3D Structure?
F045729	Metagenome / Metatranscriptome	152	N
F088844	Metagenome / Metatranscriptome	109	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0167332_10051501	F045729	N/A	VQVITNRELNSTLLEFLEGLDYFYPATKPLFQLLYNKGFRSIEVNDLQRFTIVSETEIRFKPAKNNHYRTFLIEEFPADFIEAIRKNSPKYLSISCNTMRYTFNNLYKYRKVFSGDKGISLHLFRYNFCRKLYDSGASCEQIGARLGEIDLSNLDSYLFADIYRL
Ga0167332_10051507	F088844	N/A	IFTMRSMTKFDDYFMKKGRIVSRETMEQNSEFIIYRVYRDNWKIERASKFFNDFNKNVDFREAFLLCNVVIVRLREKNLCPYCVEYFENLTQIYQHLKSWHC