Scaffold Ga0169699_100048

Overview

Basic Information

• Taxon OID: 3300029056
• Scaffold ID: Ga0169699_100048
• Source Dataset Name: Human fecal microbial communities from mother in Denmark - 397_M
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Genomics Institute (BGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 152041
• Total Scaffold Genes: 201
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 92 (45.77%)
• Novel Protein Genes: 19
• Novel Protein Genes with Ribosome Binding Sites (RBS): 9 (47.37%)
• Associated Families: 19

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae (Source: IMG-VR)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Host-Associated → Human Host-Associated Microbial Communities From Fecal Samples Of Mother And Infant In Denmark

Source Dataset Sampling Location

• Location Name: Denmark
• Coordinates
  • Lat. (^o): 55.678
  • Long. (^o): 12.531

Associated Families

Family	Category	Number of Sequences	3D Structure?
F042095	Metagenome	159	N
F050794	Metagenome	145	N
F058555	Metagenome	135	N
F064725	Metagenome	128	N
F075481	Metagenome	119	N
F076653	Metagenome	118	N
F077313	Metagenome	117	N
F078005	Metagenome	117	N
F078006	Metagenome	117	N
F080673	Metagenome	115	N
F083451	Metagenome	113	N
F083452	Metagenome	113	N
F085718	Metagenome	111	N
F089590	Metagenome	109	N
F089591	Metagenome	109	N
F089592	Metagenome	109	N
F093883	Metagenome	106	N
F098313	Metagenome	104	N
F102167	Metagenome	102	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0169699_100048118	F078005	N/A	MKKSKFVKELEKIIDMVKIEDDGFEYGGKVIFYKEDDDNYEITVKNIEMNLEVEANVMAGMDDMDFTCLMSEVYKQKAAKAIMMEKDDDEDN
Ga0169699_100048137	F083451	N/A	MIMDKNERERQVLDLLMSRKDIRKLVEKSNECYSKMDFVGAMKCRQEIKDIVDRESKIMLTKSESLVSLMNNADNEYKFNMLVWLHSMMCMADVFNGILEDFKDGVRKANGNSKFVKFDNMDRLMAECKKEIDYLMKGTSKSFQISFAVRSDELREMIENMVGDNIREGYDIFKEEAKMTKETDRSKIEEFNKRLDHE
Ga0169699_100048146	F076653	AGG	MTIMDKYFGWKDIFFDRFVHCCNEKSDQPQGSNIPLAKINFDNKTGYVEDGTINIAELLQYLWINNKVYRCEYAPIDISSVLQTLIRLTENAKHMFEDQPGVYDMIPYRGFFLRDDFSSGKDYSLDLDKIVSGMGGWYGEDEDPCYSMFVSQDQIWNLNPILKVLADEGSILAKELGYDMNSYVSDNGYTIYNPYLSWINHYYHYCPTFNEDKLKPWDRVEDRKNKFKMTDKVKRGANNWYYSGGTISCVDNFLGKEYRKNLRTFIYRGIVFFLDRIWHTPLFEKMGVKMKYNAYYCYAATSGIWYDKGFKKRLAKRFNESLRGGGDLFGANLACMVCDRRDIDWEALRLWLDKYDEPTDKGMVNSPIQFMYLYLYYAFNK
Ga0169699_100048180	F098313	AGG	MREKKFDFVIYPLDLIITVGLDYKTLCDCFENMEPEHEGKWGDEDDMDKEASFANLVRDRDDDDKFAILWNFSSDDDLIMRNICHESFHIAMSVCQFCNMSLGFKVGEDEHAAYIAGFAGDCVSGFINSKNTD
Ga0169699_100048194	F050794	N/A	MAPVGTLYIMQLDAFLHRKIMQDLRIQRVKVLMMLYTSNYFVNVRQKQLLDHTYALSRDQAFDYMAEFNKRLSDKVGIKCTMDVLLPTDDDNANIIIEHNGIIKKLMKEAEKLELDTDAIKAMMRDLLDELKDDIDLNILIFDVSQLLIKYNLFRLEAITEQEFKNSFVRMDSRNMEIKKLTLSDIKKVVEMIETRYNRFVWREKINESHRWSNICNNI
Ga0169699_100048197	F077313	N/A	MSKYVIKRKIPKYQEAGEVGPYMLGNMDGIQGLGIEPLVNTNQGLPAPVNPLGIYSLDTPDQLRTKYANAFDQDNVFPASFKGSLQRIAENYQDNGITLNNITVNDVDKSKTGSGETDVFDFTTIPYYGADDIGSRFTQMGRGIGRMRSEGYGDLSTGAKTANTITTIASGISGIMGLARNVVSGIASEKGTRTNIRLAQEREARQRRQSQMQYKDGGGVYLGSNNRFDSGSLTGEYLYPLPKSMEDQANVEVEKGEYVTQPGETPMEAMGQKHADGGTPVSLEEGTKVITDDTTIESDFAKYIRDTYGIKATPKDTYATLMDRYKAKIGLKSAYDDQKKALDKLKKNDKIDDENTRRLNASVLSKAINDSNETVNSLEGRFTDFANVIYKEQEDRKMKKDEDTYFAKGGEIDNIISRSMKEYGLTEEDIAEAKKELLKKVAGIRQKMEIGGTSLFGRKLTFRPIENRFNNDPNYFGYQRQGTDGSYGGINTDERLNYYKTFNPVAYDAYMGASEGARARALQDAIYGQTSSWMGLATTENPIIANAEALRDYTTLVSFGGEDSQGNYPEDKKAAYHDRMRDNKLGLFTTSRPMIGLDVVTEEQHKALNDAGITHFSQLFSDKNKDVVNKILGEDMLKMQALRSMKGMEGLDFILDPHKVAPGPMDIGDVEEPDVKLDMPELIDPNTLPKTNTNAGKSNSGNGGRNIVGGGLDFPEVFRMTPGAVTTEGLERHYAPTVDPVLRSADQYMVETNRAFQSQLDQMGNVPDSQRGALSSNLQAIMSSNIGRYINEVEQGNVAQRTWADNVNAQSWANTYDKNIAQRQAYQQRILQGLAINDENWARYFDSVNDEIQQKWNTATTMNTLRSIFGDVKIGPNGQLIADPQGDILSYRRLYPAQEVTKGKKG
Ga0169699_10004829	F075481	AGAAG	MMRLRISLRAVFCLGLSLSLSSCGSRRQVSEASIDSGLISRIETMIDEVMDRKIVEIKTSDLNADIVITERKFDTDKDVDPATGERPVSSQTDTHIVIGRRDSTVTADSVGVNKTRNDIKDLDNKIDIKSKDVDDKKGSRWPIAWIVAGISMILLVLVYILNRIKIL
Ga0169699_10004830	F089590	GGA	MLDKIGALWNIAIAYGTSCWAYFQPVHHLLEVLLVVLLANFIARLIQSARRWKVRRSRKRRFSLYRWFREVRLVGILKEFFLSCFIVMTLCVIYKTLSIEEDDASAILVVTKYGVYAALVAYVMLFLNTIGEAFPDTYIVKVFKSIFNRVNILKLFGSAKSLPDDAFDDIKKIADDEVKDKS
Ga0169699_10004833	F042095	N/A	MAKTLYKYEASSNKFVWFTTWDRALRNYYTDDYNYVFDPVVDNPFNTFVEFRSRKPGMANVDWGDGIKEQFPMTKAQGQDNYRIIFRSLAIQHRKNPNTTWWFRKEDGSQYVPVDNHAYADGRRDVQRAVSIDFTCDIYYANIQCCKMTAFPIVDIPGLEFLAVSHTRYVNDGIPTDKLLRSNKLIYIELSNVGQRMTEMPEAITSKTEVYYLNMFNMLDLRDIESSGIRNIKNMKKLQTFELSSCYLDRYIKEFNDLPKLKTLDITPGPSDMWNYFDINTLPFFEVDKINPNITDFYFLKDWVSGERRTGWNDDNMSGRGLEHLTGLIAANSNSLRMDKLPDYIYEMRAITRFSVNASTHSQKRSDDFVNSFYDLVVGWDQITMTSVAKDGKRNQFYSLSVSMYNAIHPTRNQRPSGTEQAPEGFVKGQSNGSPATPMEKIYVLKNNYAQRWTIKPE
Ga0169699_10004839	F089591	GGAGG	MTIQEAYLRSLQKNEQNLANGGIKLDPGRFVLLFNEAQDRLIRYYLNRKDDETIRSIQTLLVYWESLNKINHIDDPESTSFGLPDDYLWFSNIKGAFSYKGCEVGDFVMWEAKNENVHELLGDDNNRPSFDYRETFYTIGDGKVVVYESGFRTEEVKMTYYRRPVRVDLSGYINAAGIQSTDIDPELPDYLVEEILDMVAKQFNLNENELQRYRFDKDNVASFR
Ga0169699_1000484	F064725	AGAAG	MIQLAREGRLDFFCITDSNTYLCAKDLNMTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAVVKTSNKQAVLPSDFFDMLDAYRCEPLVCEIPGGDKAKADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITEKIYIGSHEVRFRYHHPVRLSIGRGLRRDCAADKYRDKYAWDNYDITISGNTMYTGFDGFIYIIYRATPKDDDGLPYIPETALGYLEDYVETYIKMKIFENAAVNGLIQGAGDAYKLYAQQEPGKFARAMKELKMSMITLNDYRELAEDNRRRMLSHERMWPNAFDKYIKLI
Ga0169699_10004840	F089592	N/A	MKEILKSKKVLVEVNGFNIMSDTLYEVVGKHDESAPQAFQDANIAKAPFPENATHVCCPWDDFSEVYNTGFYPRSRCYNGMDKDEVDKLVDQRVNNIMKPFENISQKDLSQTNFEFWDDAKDKIYMGKVYNTANTVELFYLYLAVFSGMLTPQEMDGDPIFMNSMFCFIEKDNAKDFVQQREINKMNISYKFINALKKGGKERQAVIDLLLYIGIVTRPDFTEDDYYTGSLSNWMNEKKTNIDYLLDIWDRSLEGDFKEVLEFYRIINVLQRNGRINMTPSGLQYNGQIIGPDTRTSAEFLATKKDLISVKANVLDEYEELMSISNIDDKTKTKKVKDVKKKEDVDGGDKVNTEE
Ga0169699_10004846	F093883	N/A	MMEDKDIKKEIRDYLKEEADTHIRHWLAIKRESKRLYSEIEDRTKKIALKSSSLIKEEDFVALHEMTHKIQMLNIEAVKVNSRLMFIIQLATSFGMDLDFDTTYASTAKSIMEDRTSGFVFYDDKERLRYADKELEDMFHDMSVMEVSKIGVVQSYKLLMKQYNEFKDMKANATGKTKAD
Ga0169699_10004851	F058555	N/A	METKIALLQKMKSNFDKILTEAYIPKDIQAKKDELGCLRLPAGSLVCPVDYKPVTNKDGKKVTAVKYSNKKDNIRGSGMVIEKKCKQVTAYLSIINVQKHVFLRNRMRDGYRDRIEINTDDFIDILSDGIAYFLYRHVIENCHEDIEYQLKTLKAYAEGEVRIALSDIMIYSYKAKKNEDTKDIFVGKKRSVYKCLDKNLSSDERRNMANKSRKLDRVRILSKIIFRARTRNVHHIYKVTKRKTVKFNVAYLLNELNKNLIGIGMQEISQSTIYRYISMFLDMCKKSISDLYEEVVKNNGVVNTKDNNNVTIGHIRASYKGSVLHILISTDYIINVFLGKKSAEMSKAG
Ga0169699_10004868	F102167	N/A	MDINQIKKYLPLGWDVVDLIDHGIIDLDIMNGKMMGEYVAVLMIKSYDKTNGHILTTFSFHDKDMEKLRMLIGNAIMAVGYRNNPLTGDGNSAIK
Ga0169699_10004871	F083452	GGAGG	MSGRVKIKIKDKKPKIDVFKVIESRFKNMNELRDLIDMDPRKGLVMIRDGAGFREVERGGCLHRNYLNLLEEELGAKLSIDLIDKYVKRK
Ga0169699_10004888	F080673	AGGA	MNETELLRLQDEALSYLRDNITKDEAYYVLTTDKDMIEILIADKKDGSKRIKILDMEYTIEKDDMLLLFDTDGIIDECLLVASYIGVNMYFRRQDVNAILNNINREKVMEYPYIAIQLDNIRTIEKRRVIFEITGHRIDDNKEKIDFMFVYFMARIL
Ga0169699_10004894	F078006	N/A	MDNILKRAAAELKEAGCRVFAWQDDTYNRSWSKGDYIMLYYAFPDSPNIGYLSRGEYGMSVAYSRAYIPSRGSGSGCCIKEEATFDLATALDALNGPLPRWCKAYGVYPKQYDNIDKWYNRDNHNKKLFKEI
Ga0169699_10004896	F085718	AGGAGG	MVIEFDFEIYKNGDYDKVYLRNGKEARVLCDNGKGDRPIVVMVEDDNADNYIILRYNETGRRNINSQSSLDLMLSVKEREPELWVVVISYMDNKDKRQKMVLPNFFSKNIRGNIYLQGSSKSSVSYYVDKLEEDECFDELCEKIRVKRDRIYNIEIISLSNDEAAI