Scaffold Ga0169631_100033

Overview

Basic Information

• Taxon OID: 3300029006
• Scaffold ID: Ga0169631_100033
• Source Dataset Name: Human fecal microbial communities from infant at 4 months in Denmark - 281_4M
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Genomics Institute (BGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 147365
• Total Scaffold Genes: 192
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 81 (42.19%)
• Novel Protein Genes: 18
• Novel Protein Genes with Ribosome Binding Sites (RBS): 10 (55.56%)
• Associated Families: 18

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae (Source: IMG-VR)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Host-Associated → Human Host-Associated Microbial Communities From Fecal Samples Of Mother And Infant In Denmark

Source Dataset Sampling Location

• Location Name: Denmark
• Coordinates
  • Lat. (^o): 55.678
  • Long. (^o): 12.531

Associated Families

Family	Category	Number of Sequences	3D Structure?
F042095	Metagenome	159	N
F050794	Metagenome	145	N
F057001	Metagenome	137	Y
F058555	Metagenome	135	N
F064725	Metagenome	128	N
F075481	Metagenome	119	N
F076653	Metagenome	118	N
F077313	Metagenome	117	N
F078006	Metagenome	117	N
F080673	Metagenome	115	N
F083451	Metagenome	113	N
F083452	Metagenome	113	N
F085718	Metagenome	111	N
F089590	Metagenome	109	N
F089591	Metagenome	109	N
F089592	Metagenome	109	N
F093883	Metagenome	106	N
F106193	Metagenome	100	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0169631_100033100	F083451	N/A	MIMDKNEREKQVLDLLMSRKDIRKLVEKSNECYSKMDFVGAMKCRQEIKDIVDRESKIMLTKSESLVSLMNNADNEYKFNMLVWLHSMMCMADVFNGILEDFKDGVRKANGNSKFVKFDNLDRLMTECKKEIDYLMKGTSKSFQISFAVRSDELREMIENMVGDNIREGYDMFKEEAKMTKETDRSKIEEFNKKLDHDQM
Ga0169631_10003313	F042095	N/A	MAKTLYKYEASSNKFVWFTTWDRALRNYYTDDYNYVPDPVVGNPFNTFVEFRSRKPGMANVDWGDGIKEQFPMTKVQGEDNYRIIFRSLAIQHKKNPNTTWWFRKEDGSQYVPVDNHAYADGRRDVQRAVSIDFTCDIYYVNIQVCKMTSFPIVDIPGLEFLVVSHTMYVNDGIPVDKLSRSKKLIYIDLQNIGQRMTVIPEAITSKTEVYCLIMHNMLNLRDIESSGIRNIKNMKNLQTLELSSCYLDRYIKEFNDLPKLTSLNITSGPPDMWNYFDINTLPSFEVDKINPNITIFSFLNDWMNGERRTGWNDDNMSGRGLEHLTSFVAAHSNSLRMDKLPDYIYEMRAIAWFNVNASTHSQKRSDDFVNSFYDLVVGWDQITMTSVAKDGRRNQFYGLSVSMYSSAYPYENQRPTGQEQAPEGFVKGQSNGSPATPMEKIYVLKNNYAQRWTIKPE
Ga0169631_100033143	F085718	AGGAGG	MVIEFDFEIYKNGDYDKVYLRNGKEARVLCDNGKGDRPIVVMVENDNADDYIILRYNETGRRNINSQSSLDLMLSIKEREPELWVVVISYMDNKDKRQKMVLPNFFSRNIGVYIYLQGSSKSNVSYYVGRLEEDGCFDELCEKIRVKRDRIYNMEIISLSDDKATV
Ga0169631_100033145	F078006	N/A	MDNVLKRAAAELKEAGCRVFAWQDDTYNRGWSKGDYIMLYYAFPDSPNIGYLSHGEYGMSVAYSRAYIPSCGSGSGCCVKEEATFDLATALDVLNGPLPRWCRSYGVYPKQYDNIDKWYNSDNHNKKLFKEI
Ga0169631_100033151	F080673	AGGA	MNEIELLRLQDEALFYLRDNITKDEAYYVLTTDEDMIEILIADKKDGSKRIKILDMEYTIEKDDMLLLFDTDGVIDECLLVASYIGVNMYFRRQDVNAILNNINREKVMKYPYIAIQLDNIQTIEKRRVIFEITGHRIDDNKEKIDFMFVYFMARIL
Ga0169631_100033159	F057001	AGG	MTSKDINKVQSGVKKASEKTLTGAVKAWCQLFKSGKEINEILKDNDIKVDKAVVPSLVALARDKEVVIQLCKEILPRVDETFCAYKEIERVYLDKQDQDKNTKLSEDKVAEISITGKAHKRFGYNEPVEYEGGVYYEVFNGSDKRIVKCAVPIKRYTFNLIAKCVTYYLTHPKNER
Ga0169631_10003316	F089590	N/A	MKDKDMIERVGALWNIALAYGASCWAYFQPVHHLLTVLLIVLIANFLARLAQSVRGWKLRRSRRRRFSFKRWFREVRFTDILKEFALSCFIVMTLCVIYKTLYPIEEEASMILAVTKYGVYIALVGYVMLFLNTIGDAFSDAYLVKVFKTVFKRINVFKMFSFSKNIPDETFDDIKKIADDEVKDKS
Ga0169631_100033165	F083452	GGA	MSGRIKIKPKDKDKRPKIDVFKVIENRFKNMNELRDLIDMDPRKGLVRIQDGAGFREVERGGCLHRNYLNLLEEELGAKLSIDLIERYIKR
Ga0169631_10003317	F075481	AGAAG	MMRLKISLRAIVCLGLSLFLSSCGSRRQVSDTSIDNRLISRIETMIDEVIDRKVVEIKTSDLNADIVITERKFDTDKDVDPATGERPVSSQTDTHIVIGRRDSTVTADSLGVNKTRNDIKGLDNKTNIKSKDVDDKKESRYPIVWIVAGILMILLVLVYILKKIKVL
Ga0169631_100033185	F058555	N/A	MGTKIRFLHIMKSNFDKILTERYIPRNIQTKKDELGCVKLPAGSLICPVDFKPVTNKEGKKVTAIKYSLKHEEYHGSGIQISDECKMAMIYLIIINVSKHVFLRKRMQDGNRDQIEINTNDFIDILSDGCAYFCYRHVLRDSHEDMNYQLISLKAWAEGEIMIALSDIIKYKHKASKTPRIKDMFVKKGESVYTCLDKNLDSNTRRRMANKSRKLNRVKMLSKIIFSARNRNINKIYKVTKKRTIKFNVSYLMDRLNIKLSKEGMMLISQRTVYRMIKEVLSMCCKTISDLYDEVKKNNGIVNTKDRKNVTIGHLRLSYRGTIMHIIIAEDFIKDVFLGVKGSEMSKAG
Ga0169631_100033190	F093883	GAG	MIIMRNMEDKDIKTEIRDYLKEEADTHIRHWIAIKRESKRLYSDIEDRTKKIALKSFSLIKEDDFVVLHEMTHKIQMLNIEAVKVNSRLMFIIQLATSFGMDLDLDTTYASTAKSIIEDRTSGFVFYDDKERLRYADKELEDMFHDMSVTEVSKIGVVQSYELLMKQYNEFKDMKSNATGKTKADE
Ga0169631_10003325	F106193	N/A	MGCNTCKEKALKAERERIERSMMNRPSSTVVSDREYASRSTAGCMVMLDPLKTMERDVVSIYKQTRTIGDVGIVYLNMQKKIREWIKNLPYGCPPDEEVQEMRKEILDGRAIYIKP
Ga0169631_10003342	F064725	AGAAG	VIQLAREGRLDFFCITDSNTYLCAKDLNMTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAVVKTSNKQAVLPSDFFDMLDAYRCEPLICEIPGGDKAKADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITERIYIGSHEVRFHYHHPVRLSIGRGLRRDCAADKYRDKYDWDNYDITISGNTMYTGFDGFIYIIYRATPKDDDGLPYIPETALGYLEDYVETYIKMKIFENAAVNGLIQGAGDAYKLYAQQEPGKFARAMKELKMSMITLNDYRELAEDNRRRMLSYERMWPNAFDKYIKMV
Ga0169631_1000335	F089592	N/A	MKEILKSRKVLAEVNGFNIMSDTLYEVVGKHDGSAPQAFQDANIAKAPFPENATHVCCPWDDFSKAYNTGFYPRSRCYNGLDKNEIDRLVKQRVDNIMKPFEEMSQMDLSQTNLEFWDDAKDKIFMGKVYNTANTVDLFYLYLAVFSGMLTPKEMDGDPVFMNSMFCFVEKDNMKDFVQQREINKMNISYKFISALKKGGDDRQAVIDLLLYIGIVTRPDFTEDEYYTGSLSNWMNEKKTNVDYLLDIWDRSLEGDFKEVLEFYRIVNVLQRNGRINMTPSGLQYNGQIIGPDVRTSAEFLATKKDFINIKANVLDEYEEIMSMSNIDDKSKTKKVKDIKKKDDVEEGDKIKEE
Ga0169631_10003352	F077313	N/A	MSKYVIKRKIPKYQEAGEVGSYMLGNMDGIQGLGIEPLVNTNQGLPASVNPLGIYSLDTPDQLRTKYANAFDHDNMFPASFKGSLQRIAENYQDNGITLNNITVNDVDKSKTGSGETDVFDFTTIPYYGADDIGSRFTQMGRGIGRMRSEGYGDLSTGAKTANTITTIASGISGIMGLARNVVSGIASEKGTRTNIRLAQEREARQRRQSQMQYKDGGGVYLGPNNRVDSGSLTGEYLYPLPKSMEDQANVEVEKGEYVTQPGEAPMEAMGQKHADGGTPVSLEQGTKVITDDTTIEPDFAKYIRDTYGIKATPKDTYATLMDRYKAKIGLKPAYDDQKKALEKLKKNDKIDDENTRRLNASVLSKAINDSNDIVNGLEGRFTDFANVIYKEQEDRKIKKDEDTYFAKGGEIDNIISRSMKEYGLTEEDIAEAKKELLKKVAGIRQKMEIGGTSLFGRKLTFRPIENRFNNDPNYFGYQRQGTDGSYGGINTDERLNYYKTFNPVAYDAYMGASEGARTRALQDAIYGQTSSWMGLATAENPIIANAEALRDYTTLVSFGGEDSQGNYPEDKKAAYHDRMRDNKLGLFTTSRPMIGLDVVTEEQHKALNDAGITHFSQLFSDKNKDVVNKILGEDMLKMQALRSMKGMEGLDFILDPHKVAPGPMDIGDVEEPDVKLDMPELIDPNTLPKTNTNAGKSNSGNGGRNIVGGGLDFPEVFRMTPGAVTTEGLERHYAPTVDPVLRSADQYMVETNRAFQSQLDQMGNVPDSQRGALSSNLQAIMSSNIGKYINEVEQGNVAQRTWADNVNSQSWANTYDKNIAQRQAYQQRILQGLAINDENWARYFDSVNDEIQQKWNTATTMNTLRSIFGDVKIGPNGQLIADPQGDILSYRRLYPAQEVTKGKKG
Ga0169631_10003356	F050794	GAG	MNVNLINKINDFNNVQLDAFLHRKIMQDLRVQRVKVLMMLYTSHYFVNNRQRQLFDHTYALSRDQAFDYMTEFNKRLSDKVGIKCTMDILLPTDDDNANIIIEYNGIIKKLMKEAEKLELDTDAIKEMMRDLLNELKDDVDLNILIFDVTQLLIKYNLFRLDAITEQEFKDSFVRMDSRNMEIKKLTLSDIKKVVEMIETRYNRFVW
Ga0169631_1000336	F089591	AGGAGG	MTIQEAYLRSLQKNEQNLANGGIKLDPGRFVLLFNEAQDRLVKYYLNRKDDETIRSIQNLLVYWMSLDNAVRMDDPESTSFNLPDDYLWFSNIKGVFSYKGCEATDFVMWEAKNENIHELLGDENNRPSYDYRETFYSIGNGKVVVYESGFRTEEVKMTYYRRPVRVDLSGYINAAGIQSTDIDPELPDYLVEEILDMVAKQFNLNENELYRYRMDKDNVASFK
Ga0169631_10003393	F076653	AGG	MTIRDKYFGWKDIFFDRFVHCCNEKSDQPQGSNIPLAKINFDNKTGYVEDGTINIAELLQYLWINNKVYRCEYAPIDISSVLQTLIRLTENAKFIFDDQPGIHDMIPYRGFFLRDDFLPGKDYSLDLDKIVSGMGGWYGEDEDPCYSMFVSQDQIWNLNPILKVLADEGSILAKELGYDMNSYVSDNGYTIYNPYLSWINHYYHYCPTFNEDKLKPWDRVEDRKNKFKMTDKVKRGANNWYCSGGTISCVDNFLGKEYRKNLRTFIYRGIVFFLDRIWHTPLFEKMGVKMKYNAYYCYAATSGIWYDKGFKERLAKRFNKSLGGDGELFGANLACMVCDRKDIDWEALRLWLDKYDDPTDKGMVNSPIQFMYLYLYYTFNK